RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TMBIM6P55061 237 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 OR12D2P58182 307 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 SSX1Q16384 188 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 SPATS1Q496A3 300 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 ARMC4Q5T2S8 1044 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 ZNF57Q68EA5 555 aaPredicted RBP8.4□□□□□ -1.06
CKAP2-201ENST00000258607 KIRREL2Q6UWL6 708 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 TMEM184AQ6ZMB5 413 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 SIRT6Q8N6T7 355 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 OR52I1Q8NGK6 324 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 OR8J1Q8NGP2 316 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 C10orf90Q96M02 699 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 TTYH2Q9BSA4 534 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 ULBP3Q9BZM4 244 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 MMP28Q9H239 520 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 TMEM165Q9HC07 324 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 Q9N2J8 555 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 SIDT1Q9NXL6 827 aaKnown RBP8.4□□□□□ -1.06
CKAP2-201ENST00000258607 ETAA1Q9NY74 926 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 REV1Q9UBZ9 1251 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 GNG8Q9UK08 70 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 SSR3Q9UNL2 185 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 MED31Q9Y3C7 131 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 CACNA1DQ01668 2161 aa8.4□□□□□ -1.06
CKAP2-201ENST00000258607 A0A0G2JPF8 293 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 A6NL46 340 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 SHISA7A6NL88 538 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 ZAR1LA6NP61 321 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 HNRNPCL2B2RXH8 293 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 HNRNPCL3B7ZW38 293 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 TIAF1O95411 115 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 CBX7O95931 251 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 HNRNPCL4P0DMR1 293 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 ITIH1P19827 911 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.07
CKAP2-201ENST00000258607 ARRB1P49407 418 aaPredicted RBP8.4□□□□□ -1.07
CKAP2-201ENST00000258607 FOXK1P85037 733 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 PSG6Q00889 435 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 BIKQ13323 160 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 CD226Q15762 336 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 CARD17Q5XLA6 110 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 GPAT4Q86UL3 456 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 GKN2Q86XP6 184 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 ZNF578Q96N58 590 aaPredicted RBP8.4□□□□□ -1.07
CKAP2-201ENST00000258607 NELL2Q99435 816 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 OR10A5Q9H207 317 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 KCNN2Q9H2S1 579 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 UBQLN3Q9H347 655 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 MTHFD2LQ9H903 347 aaPredicted RBP8.4□□□□□ -1.07
CKAP2-201ENST00000258607 FOLH1BQ9HBA9 442 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 CCNB1IP1Q9NPC3 277 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 POT1Q9NUX5 634 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 TUBA8Q9NY65 449 aaPredicted RBP8.4□□□□□ -1.07
CKAP2-201ENST00000258607 DOCK10Q96BY6 2186 aa8.4□□□□□ -1.07
CKAP2-201ENST00000258607 ELOA3DA6NLF2 546 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 FOXS1O43638 330 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 ERGP11308 486 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 IL12BP29460 328 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 SERPINB1P30740 379 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 SOX6P35712 828 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 OR10A3P58181 314 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 CXCR4P61073 352 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 HNRNPKP61978 463 aaKnown RBP eCLIP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 IL18Q14116 193 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 MELKQ14680 651 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 RSPO4Q2I0M5 234 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 ELOA3BQ3SY89 546 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 FBXO43Q4G163 708 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 MRM1Q6IN84 353 aaKnown RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 HOMEZQ8IX15 550 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 CELF2-AS1Q8N7Q2 184 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 ELOA3Q8NG57 546 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 OR2T33Q8NG76 320 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 Q96M85 177 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 TRNT1Q96Q11 434 aaKnown RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 TBL1XR1Q9BZK7 514 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 TRIM2Q9C040 744 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 HDHD2Q9H0R4 259 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 TIMMDC1Q9NPL8 285 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 CUTCQ9NTM9 273 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 LYARQ9NX58 379 aaKnown RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 PRR23D1E9PI22 279 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 CPNE3O75131 537 aaKnown RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 PRR23D2P0DMB1 279 aaPredicted RBP8.39□□□□□ -1.07
CKAP2-201ENST00000258607 SPNP16150 400 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 SFTPDP35247 375 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 RFC3P40938 356 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 KIAA1024LP59773 190 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 DMPKQ09013 629 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 ALKBH2Q6NS38 261 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 GPR155Q7Z3F1 870 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 FNDC8Q8TC99 324 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 DUSP19Q8WTR2 217 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 ZFAND2BQ8WV99 257 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 GIMAP5Q96F15 307 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 RTN4RQ9BZR6 473 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 BOLA1Q9Y3E2 137 aa8.39□□□□□ -1.07
CKAP2-201ENST00000258607 RPL36Q9Y3U8 105 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms