RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 MAOAP21397 527 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 GABRA5P31644 462 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 STX4Q12846 297 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 DSG2Q14126 1118 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 ZNF79Q15937 498 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 AMZ1Q400G9 498 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 NPSR1Q6W5P4 371 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 GKN2Q86XP6 184 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 OR8H2Q8N162 312 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 OR52L1Q8NGH7 329 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 HDHD5Q9BXW7 423 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 ABCB9Q9NP78 766 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 GNB5O14775 395 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 AQP9O43315 295 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 IL1AP01583 271 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 NGFRP08138 427 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 CELP19835 753 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 DRD5P21918 477 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 AFF3P51826 1226 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 HNRNPKP61978 463 aaKnown RBP eCLIP17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 NDUFAF6Q330K2 333 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 WDR45BQ5MNZ6 344 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 NIPAL3Q6P499 406 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 TMPRSS11AQ6ZMR5 421 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 SPATC1Q76KD6 591 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 RNF113BQ8IZP6 322 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 HOXB13Q92826 284 aaPredicted RBP17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 ART5Q96L15 291 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 KATNB1Q9BVA0 655 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 IFT27Q9BW83 186 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 MIXL1Q9H2W2 232 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 DNAJB12Q9NXW2 375 aaKnown RBP17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 TNFRSF10DQ9UBN6 386 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 MED31Q9Y3C7 131 aa17.26■□□□□ 0.35
PDLIM4-201ENST00000253754 PI4KAP42356 2102 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 A0A0B4J2E0 115 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 IQCMA0A1B0GVH7 501 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 A0A1B0GWA3 101 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 A0A1B0GX12 115 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 DVL2O14641 736 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 HRO43593 1189 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 FMO6PO60774 539 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 PTTG1O95997 202 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 PGDP52209 483 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 GFERP55789 205 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 SIGLEC14Q08ET2 396 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 ZNF267Q14586 743 aaPredicted RBP17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 DEFB133Q30KQ1 61 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 KLHL12Q53G59 568 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 GARNL3Q5VVW2 1013 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 VASNQ6EMK4 673 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 MAMSTRQ6ZN01 415 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 KLBQ86Z14 1044 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 KLHL36Q8N4N3 616 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 TMEM99Q8N816 258 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 RBM18Q96H35 190 aaKnown RBP17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 VSTM2LQ96N03 204 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 TMEM27Q9HBJ8 222 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 ISYNA1Q9NPH2 558 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 SIGLEC7Q9Y286 467 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 CMAHPQ9Y471 501 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 TMEM184BQ9Y519 407 aaPredicted RBP17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 CLDN16Q9Y5I7 305 aa17.25■□□□□ 0.35
PDLIM4-201ENST00000253754 J3QRE1 110 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 RNH1P13489 461 aaKnown RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 BMP7P18075 431 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 NOS3P29474 1203 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 CAPZBP47756 277 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 GATAD2AQ86YP4 633 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 RCBTB1Q8NDN9 531 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 SMAP2Q8WU79 429 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 LMF2Q9BU23 707 aaKnown RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 TBC1D24Q9ULP9 559 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 TP53BP1Q12888 1972 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 CACNA1EQ15878 2313 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 A0A1W2PQL4 384 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 REM1O75628 298 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 NCR1O76036 304 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 SNX4O95219 450 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 CLUP10909 449 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 ACAA2P42765 397 aaKnown RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 EIF2B2P49770 351 aaKnown RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 FOXK2Q01167 660 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 ZNHIT3Q15649 155 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 BAK1Q16611 211 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 TMEM44Q2T9K0 475 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 ZNF322Q6U7Q0 402 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 TMPRSS11FQ6ZWK6 438 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 BMP8AQ7Z5Y6 402 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 LNX2Q8N448 690 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 NLGN4YQ8NFZ3 816 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 KISS1RQ969F8 398 aaPredicted RBP17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 ZNF559Q9BR84 538 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 UCKL1Q9NWZ5 548 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 FBXL4Q9UKA2 621 aa17.24■□□□□ 0.35
PDLIM4-201ENST00000253754 SHISA3A0PJX4 238 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 C12orf71A8MTZ7 269 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 PROS1P07225 676 aa17.23■□□□□ 0.35
PDLIM4-201ENST00000253754 MRPL3P09001 348 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms