RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 CHP2O43745 196 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 ANGPTL1O95841 491 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 HPGDP15428 266 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 GSSP48637 474 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 TMED10P49755 219 aaKnown RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 CLK3P49761 638 aaKnown RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 GPR143P51810 404 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 IL5RAQ01344 420 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 MVKQ03426 396 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 CD47Q08722 323 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 CDC20Q12834 499 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 PPP1R8Q12972 351 aaKnown RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 CDK5R2Q13319 367 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 RAPSNQ13702 412 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 MAD2L1BPQ15013 274 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 CRTC2Q53ET0 693 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 KLHL26Q53HC5 615 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 SLC25A30Q5SVS4 291 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 PDZK1Q5T2W1 519 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 CCNJQ5T5M9 372 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 C1orf189Q5VU69 101 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 KLHL17Q6TDP4 642 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF730Q6ZMV8 503 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 RASSF6Q6ZTQ3 369 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 WDR53Q7Z5U6 358 aaPredicted RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 ANKRD37Q7Z713 158 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 GALNT5Q7Z7M9 940 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 COMTD1Q86VU5 262 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 ALDH16A1Q8IZ83 802 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 CDK20Q8IZL9 346 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 ESX1Q8N693 406 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 OR9Q2Q8NGE9 314 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 ULBP3Q9BZM4 244 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 SLC19A3Q9BZV2 496 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 WWTR1Q9GZV5 400 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 QRSL1Q9H0R6 528 aaKnown RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 IMPAD1Q9NX62 359 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 DNAJB12Q9NXW2 375 aaKnown RBP12.13□□□□□ -0.47
SLIRP-201ENST00000238688 SELENONQ9NZV5 590 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 PCDHGB6Q9Y5F9 930 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 PCDHGA6Q9Y5G7 932 aa12.13□□□□□ -0.47
SLIRP-201ENST00000238688 A0A087WUU8 490 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 DPPA5A6NC42 116 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 OR6C70A6NIJ9 312 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SNTNA6NMZ2 147 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SLC1A7O00341 560 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 PEX12O00623 359 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 EIF4E2O60573 245 aaKnown RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 MITFO75030 526 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 GASTP01350 101 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 TFAP2AP05549 437 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 PRKAR1AP10644 381 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 JUNBP17275 347 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 IL12BP29460 328 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 COPZ1P61923 177 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SNRPGP62308 76 aaKnown RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 TUBA3CQ13748 450 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 LAPTM4AQ15012 233 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SEC23BQ15437 767 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 MAPK14Q16539 360 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SLX4IPQ5VYV7 408 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 ULK3Q6PHR2 472 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 C6orf15Q6UXA7 325 aaPredicted RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 HSDL2Q6YN16 418 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 GDF7Q7Z4P5 450 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 CPEB2Q7Z5Q1 589 aaKnown RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 RBM45Q8IUH3 476 aaKnown RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 P3H2Q8IVL5 708 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 DND1Q8IYX4 353 aaKnown RBP12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SLC15A4Q8N697 577 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 RHOXF1Q8NHV9 184 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 OSTF1Q92882 214 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SPSB2Q99619 263 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 NIPSNAP1Q9BPW8 284 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 ZNF426Q9BUY5 554 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 NUDT9Q9BW91 350 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SLC25A18Q9H1K4 315 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 ADNPQ9H2P0 1102 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 MED17Q9NVC6 651 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 KCNE5Q9UJ90 142 aa12.12□□□□□ -0.47
SLIRP-201ENST00000238688 A0A0B4J2E0 115 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 A0A1B0GX12 115 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CPSF4LA6NMK7 179 aaKnown RBP12.11□□□□□ -0.47
SLIRP-201ENST00000238688 ALG1L2C9J202 215 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 HRKO00198 91 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 OR6B1O95007 311 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CLIC3O95833 236 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CSTAP01040 98 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 RAB40ALP0C0E4 278 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 PNMTP11086 282 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 SFTPCP11686 197 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CHMP24386 653 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 DLSTP36957 453 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 ALDH3B2P48448 385 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 SMSP52788 366 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 CTBP2P56545 445 aa12.11□□□□□ -0.47
SLIRP-201ENST00000238688 PTGES3Q15185 160 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms