RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ERVK13-1Q9NX77 482 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 PROCRQ9UNN8 238 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 ICKQ9UPZ9 632 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 CTNSO60931 367 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 TSPAN9O75954 239 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 ZGLP1P0C6A0 271 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 TRA2BP62995 288 aaKnown RBP12.82□□□□□ -0.36
SIX4-201ENST00000216513 TYSND1Q2T9J0 566 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 OR11L1Q8NGX0 322 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 MYNNQ9NPC7 610 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 RGPD4Q7Z3J3 1758 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 LOC105369274A0A096LPK9 316 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 A6NIZ1 184 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 CLDN25C9JDP6 229 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 RAP1BP61224 184 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 RAP1AP62834 184 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 MZT1Q08AG7 82 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.82□□□□□ -0.36
SIX4-201ENST00000216513 OR4N4Q8N0Y3 316 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 SENP5Q96HI0 755 aaPredicted RBP12.82□□□□□ -0.36
SIX4-201ENST00000216513 KCTD7Q96MP8 289 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 ITPAQ9BY32 194 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 CCDC59Q9P031 241 aaKnown RBP12.82□□□□□ -0.36
SIX4-201ENST00000216513 KLHL42Q9P2K6 505 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 FPR1P21462 350 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 EMP3P54852 163 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 DEFA5Q01523 94 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 ARSGQ96EG1 525 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 COQ10AQ96MF6 247 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 SLC46A1Q96NT5 459 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 HDHD5Q9BXW7 423 aa12.82□□□□□ -0.36
SIX4-201ENST00000216513 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 COL11A2P13942 1736 aaPredicted RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 STSP08842 583 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 TMEM225BP0DP42 221 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 CELP19835 753 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 NXPH1P58417 271 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 AP3S2P59780 193 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 FZD2Q14332 565 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 CPT1CQ8TCG5 803 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 NUFIP1Q9UHK0 495 aaKnown RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 MGAT4AQ9UM21 535 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 E7ESA3 106 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 GRK5P34947 590 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 SSX6Q7RTT6 188 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 PAQR7Q86WK9 346 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 SLC33A1O00400 549 aaPredicted RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 FBXO45P0C2W1 286 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 SLC1A3P43003 542 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 RPS18P62269 152 aaKnown RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 ZNF829Q3KNS6 432 aaPredicted RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 WBP2NLQ6ICG8 309 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 FAM83HQ6ZRV2 1179 aaPredicted RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 NDUFAF7Q7L592 441 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 ELP5Q8TE02 316 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 TSLPQ969D9 159 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 SLC7A6OSQ96CW6 309 aaPredicted RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 ZNF587BE7ETH6 402 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 PAMR1Q6UXH9 720 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 GID4Q8IVV7 300 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 SLC6A7Q99884 636 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 HINT2Q9BX68 163 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 SLC5A7Q9GZV3 580 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 VSX1Q9NZR4 365 aaPredicted RBP12.81□□□□□ -0.36
SIX4-201ENST00000216513 CNIH4Q9P003 139 aa12.81□□□□□ -0.36
SIX4-201ENST00000216513 LOC102725191A0A1B0GVB3 256 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 NPPAP01160 153 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 CEACAM7Q14002 265 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 OLIG3Q7RTU3 272 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 SLC35F3Q8IY50 421 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 SLC23A2Q9UGH3 650 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 WDR37Q9Y2I8 494 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
SIX4-201ENST00000216513 AQP12BA6NM10 295 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 HRO43593 1189 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 CHP2O43745 196 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 IGLV3-27P01718 113 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 IGHG1P01857 330 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 SDC1P18827 310 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 NFATC3Q12968 1075 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 UBE2UQ5VVX9 321 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 KLBQ86Z14 1044 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 AQP12AQ8IXF9 295 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 CYB561A3Q8NBI2 242 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 SP7Q8TDD2 431 aaPredicted RBP12.8□□□□□ -0.36
SIX4-201ENST00000216513 NTMT1Q9BV86 223 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 RAD52P43351 418 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 ATP4BP51164 291 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 RGNQ15493 299 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 RBMS3Q6XE24 437 aaKnown RBP12.8□□□□□ -0.36
SIX4-201ENST00000216513 OR8J3Q8NGG0 315 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 TMEM14AQ9Y6G1 99 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 TRIM64BA6NI03 449 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 M0R1B8 84 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 CRABP1P29762 137 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 HTR5AP47898 357 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 OR8B8Q15620 311 aa12.8□□□□□ -0.36
SIX4-201ENST00000216513 TNFAIP8L3Q5GJ75 292 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms