RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 PLCXD2Q0VAA5 305 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 NCF4Q15080 339 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CD226Q15762 336 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZNF613Q6PF04 617 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 HSDL2Q6YN16 418 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 MBOAT2Q6ZWT7 520 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 LSMEM1Q8N8F7 131 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 FAM71CQ8NEG0 241 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 B4GALNT2Q8NHY0 566 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 FAM46AQ96IP4 442 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PHOX2BQ99453 314 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 C19orf25Q9UFG5 118 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 SLC35A3Q9Y2D2 325 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 C9J4A7 227 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 SCDO00767 359 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 IL12BP29460 328 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ADH7P40394 386 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZNF550Q7Z398 422 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 SLC34A3Q8N130 599 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GATSQ8NAP1 163 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PIGXQ8TBF5 258 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 RORBQ92753 470 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ITFG2Q969R8 447 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 OMA1Q96E52 524 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 VMP1Q96GC9 406 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 LIN37Q96GY3 246 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TMEM27Q9HBJ8 222 aa18.07■□□□□ 0.48
TNFRSF1A-201ENST00000162749 RGS10O43665 173 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PIP5K1CO60331 668 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 STK17BO94768 372 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TBXA2RP21731 343 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 SYT6Q5T7P8 510 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PRSS33Q8NF86 280 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GRHL3Q8TE85 626 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ACOT13Q9NPJ3 140 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 A0A1B0GWA3 101 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CSO75390 466 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 FADS2O95864 444 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 UMODP07911 640 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GSTM3P21266 225 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TGM1P22735 817 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TSPAN31Q12999 210 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ANKDD1AQ495B1 522 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 C16orf47Q6ZP98 133 aaPredicted RBP18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CCDC103Q8IW40 242 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TP53INP1Q96A56 240 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 YIPF6Q96EC8 236 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TRIM2Q9C040 744 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 NCDNQ9UBB6 729 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PISDQ9UG56 409 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PTRH2Q9Y3E5 179 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PCDHGA1Q9Y5H4 931 aa18.06■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CELSR3Q9NYQ7 3312 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 M0R129 80 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CHP2O43745 196 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 LCN1P31025 176 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PNLIPRP2P54317 469 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 SLC26A5P58743 744 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CDC42P60953 191 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ALDH6A1Q02252 535 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CCDC81Q6ZN84 652 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PRSS48Q7RTY5 328 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 DEPDC4Q8N2C3 294 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 POGLUT1Q8NBL1 392 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 RHOXF1Q8NHV9 184 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 NUBPLQ8TB37 319 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GNPDA2Q8TDQ7 276 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TMEM239Q8WW34 195 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CCNB1IP1Q9NPC3 277 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZNF226Q9NYT6 803 aa18.05■□□□□ 0.48
TNFRSF1A-201ENST00000162749 A0A1W2PNU3 283 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 KLF4O43474 513 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 MRPS14O60783 128 aaKnown RBP18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 LRP3O75074 770 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GABARAPO95166 117 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 JMJD7P0C870 316 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GABRB1P18505 474 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 FPR3P25089 353 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GPR4P46093 362 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 BMXP51813 675 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 MOGQ16653 247 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 DHRS13Q6UX07 377 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 AHSA2Q719I0 299 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 KIF18BQ86Y91 864 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 CROCCP3Q8IVE0 287 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 PHOSPHO1Q8TCT1 267 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 THAP3Q8WTV1 239 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 FAM210AQ96ND0 272 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZPBPQ9BS86 351 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 RTN4RQ9BZR6 473 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 IMPAD1Q9NX62 359 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 GVINP1Q7Z2Y8 2422 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 LOC102723996A0A087X1L8 192 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TRBV11-1A0A0K0K1C0 115 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TMEM200CA6NKL6 621 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZNF354AO60765 605 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 UBL4AP11441 157 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 SKP2Q13309 424 aa18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 ZNF829Q3KNS6 432 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-201ENST00000162749 TBC1D25Q3MII6 688 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms