RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 SQLEQ14534 574 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 KLHL26Q53HC5 615 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 C6orf10Q5SRN2 563 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 HEPHL1Q6MZM0 1159 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 B4GALNT2Q8NHY0 566 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 PNPT1Q8TCS8 783 aaKnown RBP17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 PIGQQ9BRB3 760 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 ZNF350Q9GZX5 532 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 UBTD1Q9HAC8 227 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 CCDC167Q9P0B6 97 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 MKLN1Q9UL63 735 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 DTNAQ9Y4J8 743 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 MXRA5Q9NR99 2828 aa17.02■□□□□ 0.32
TRAPPC6A-201ENST00000006275 A0A0G2JND7 137 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 NPIPB9F8W1W9 429 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 H0Y3Z8 333 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GTPBP1O00178 669 aaKnown RBP17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 HCRTR2O43614 444 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZCCHC18P0CG32 403 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 NCF2P19878 526 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 LHX2P50458 406 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 RNF144AP50876 292 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 B3GALT5-AS1P59052 145 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GLYR1Q49A26 553 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GPAT3Q53EU6 434 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 AGKQ53H12 422 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 OLIG3Q7RTU3 272 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 FUNDC1Q8IVP5 155 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 OR5M1Q8NGP8 315 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZPLD1Q8TCW7 415 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZFP90Q8TF47 636 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ROPN1LQ96C74 230 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZFP3Q96NJ6 502 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 NMUR2Q9GZQ4 415 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 SLC6A13Q9NSD5 602 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 VDAC3Q9Y277 283 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 WDR45Q9Y484 360 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TESMINQ9Y4I5 508 aa17.01■□□□□ 0.31
TRAPPC6A-201ENST00000006275 RNF212BA8MTL3 300 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 LINC01387J3KSC0 135 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 HMGN4O00479 90 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 NR5A2O00482 541 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 FCMRO60667 390 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 CRLF1O75462 422 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 CNOT4O95628 575 aaKnown RBP17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TROVE2P10155 538 aaKnown RBP eCLIP17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 PEPDP12955 493 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 CPOXP36551 454 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZNF41P51814 821 aaPredicted RBP17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 HPCAP84074 193 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GUCY1A3Q02108 690 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZNF117Q03924 483 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ACKR1Q16570 336 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GTDC1Q4AE62 458 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 COX20Q5RI15 118 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 PDZK1Q5T2W1 519 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 SLC2A7Q6PXP3 512 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 BLOC1S3Q6QNY0 202 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 INTS12Q96CB8 462 aaKnown RBP17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 SPDL1Q96EA4 605 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TM9SF2Q99805 663 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 POLE3Q9NRF9 147 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TRIM33Q9UPN9 1127 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 CARD8Q9Y2G2 431 aa17■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ROS1P08922 2347 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 A0A087WZY1 265 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 OR2M5A3KFT3 312 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 SHISA8B8ZZ34 492 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 H3BML4 177 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TNFRSF21O75509 655 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GUSBP08236 651 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 VIMP08670 466 aaKnown RBP16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZNF708P17019 499 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 P2RX1P51575 399 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 CLDN18P56856 261 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 FUT5Q11128 374 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZNF141Q15928 474 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 BCL2A1Q16548 175 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TYW3Q6IPR3 259 aaKnown RBP16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GCNT2Q8N0V5 402 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 GTF2H4Q92759 462 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 PIK3IP1Q96FE7 263 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TUBA1CQ9BQE3 449 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 PIGMQ9H3S5 423 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 RABEP2Q9H5N1 569 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TPT1P8Q9HAU6 139 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 MED17Q9NVC6 651 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 FGFR1OP2Q9NVK5 253 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 TMEM45AQ9NWC5 275 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 LIPT1Q9Y234 373 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 ZNF337Q9Y3M9 751 aa16.99■□□□□ 0.31
TRAPPC6A-201ENST00000006275 PRAMEF27A3QJZ7 478 aa16.98■□□□□ 0.31
TRAPPC6A-201ENST00000006275 SERINC4A6NH21 518 aa16.98■□□□□ 0.31
TRAPPC6A-201ENST00000006275 DEFB108AA8MXU0 73 aa16.98■□□□□ 0.31
TRAPPC6A-201ENST00000006275 SIAH2O43255 324 aa16.98■□□□□ 0.31
TRAPPC6A-201ENST00000006275 KIAA0513O60268 411 aa16.98■□□□□ 0.31
TRAPPC6A-201ENST00000006275 UGT2B17O75795 530 aa16.98■□□□□ 0.31
TRAPPC6A-201ENST00000006275 RCBTB2O95199 551 aa16.98■□□□□ 0.31
TRAPPC6A-201ENST00000006275 NUDT14O95848 222 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms