RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Slc22a12Q8CFZ5 553 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc22a6Q8VC69 545 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr826Q8VFU6 313 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr825Q8VFU7 320 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fmo4Q8VHG0 560 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rab40bQ8VHP8 278 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Hrh4Q91ZY2 391 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Yipf2Q99LP8 312 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zmynd19Q9CQG3 227 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 GmfgQ9ERL7 142 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sp6Q9ESX2 376 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr71Q9QZ18 312 aa9.12□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr634-ps1A0A1B0GRN7 318 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 1700023F06RikA2AB62 382 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1206A2ATJ9 307 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr723E9PZU2 309 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn2r105E9Q3A5 860 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 8030474K03RikE9Q4Y8 554 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 9930021J03RikH3BKP8 2027 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr724K7N5X7 309 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zfp60P16374 707 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Timp2P25785 220 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Nt5c3bQ3UFY7 300 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 E330014E10RikQ3UL33 481 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pdp1Q3UV70 538 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 D5Ertd577eQ499F0 481 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sez6Q7TSK2 991 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 NarsQ8BP47 559 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Q8C4P0 716 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Irf2bplQ8K3X4 775 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn1r219Q8R271 312 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Q8R3C1 574 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Erlec1Q8VEH8 483 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Mrgpra5Q91ZC7 304 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cd209dQ91ZW8 237 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sfxn1Q99JR1 322 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Natd1Q9DBW3 110 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Avpr1bQ9WU02 421 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zfp68Q9Z116 606 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Sema4fQ9Z123 777 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tmem156A0A1D5RLR8 321 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Ppp1r3dA2AJW4 279 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1095A3KPP7 308 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Vmn2r113E9PZA6 856 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm21876F6XK35 94 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1360K9J6X0 313 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 RrhO35214 337 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 DdostO54734 441 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 GcatO88986 416 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Acvr2aP27038 513 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Hoxa2P31245 372 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Atp5j2P56135 88 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fkbp14P59024 211 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Bpifa1P97361 278 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Gm732Q3V0P9 516 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc35g3Q5F297 340 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc44a5Q5RJI2 710 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 CalcrQ60755 533 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tpgs2Q66JT5 296 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Scgb2b2Q6UGQ3 114 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr1359Q7TQU5 313 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rae1Q8C570 368 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zbtb26Q8C8S0 451 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Uhrf1Q8VDF2 782 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Plet1Q8VEN2 237 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Egln3Q91UZ4 239 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Hint3Q9CPS6 165 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Med31Q9CXU1 131 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rnf186Q9D241 226 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Lman2Q9DBH5 358 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 RbpmsQ9WVB0 197 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Wdr81Q5ND34 1934 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Plxna4Q80UG2 1893 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pcdhgb8A0A140LI48 931 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Glb1l3A2RSQ1 649 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Fcn1O70165 334 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rad52P43352 420 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Cd38P56528 304 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 SnrpgP62309 76 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 DmknQ6P253 517 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zfp866Q6PGD2 520 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Dsg1cQ7TSF0 911 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pramef8Q8CE24 480 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Zdhhc5Q8VDZ4 715 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Olfr308Q8VFP2 308 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Park7Q99LX0 189 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PigkQ9CXY9 395 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pmepa1Q9D7R2 260 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Rtp4Q9ER80 249 aaKnown RBP9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Srebf1Q9WTN3 1134 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Srpk3Q9Z0G2 565 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Slc7a5Q9Z127 512 aa9.11□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 9330182O14RikJ3QNB2 140 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Pgam2O70250 253 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 P01648 108 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 ArafP04627 604 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Tcf3P15806 651 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 Csf2rb2P26954 878 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 PvalbP32848 110 aa9.1□□□□□ -0.95
Pcdh1-201ENSMUST00000057185 TpoP35419 914 aa9.1□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 32 ms