RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 GPR55Q9Y2T6 319 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-234ENST00000642041 OR10H1Q9Y4A9 318 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 POLEQ07864 2286 aa15.85■□□□□ 0.13
PHGDH-234ENST00000642041 SPG11Q96JI7 2443 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 ABCA2Q9BZC7 2435 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 FRG2CA6NGY1 282 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 SNTNA6NMZ2 147 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 M0R3G1 203 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 CPNE3O75131 537 aaKnown RBP15.84■□□□□ 0.13
PHGDH-234ENST00000642041 CYP7B1O75881 506 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 KCNK2O95069 426 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 CTSBP07858 339 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 PRKACGP22612 351 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 KRT20P35900 424 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 HLCSP50747 726 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 PGDP52209 483 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 MAT1AQ00266 395 aaKnown RBP15.84■□□□□ 0.13
PHGDH-234ENST00000642041 MYBPC1Q00872 1141 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 PSG6Q00889 435 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 RHAGQ02094 409 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 NSDHLQ15738 373 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 MINDY4Q4G0A6 757 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 FLYWCH1Q4VC44 716 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 PRR30Q53SZ7 412 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-234ENST00000642041 MFSD4BQ5TF39 518 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF613Q6PF04 617 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 SLC29A4Q7RTT9 530 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 TSEN54Q7Z6J9 526 aaKnown RBP15.84■□□□□ 0.13
PHGDH-234ENST00000642041 CDK20Q8IZL9 346 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 ZNF615Q8N8J6 731 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 GNPDA2Q8TDQ7 276 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 MPP4Q96JB8 637 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 Q96MT0 163 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 TUBA1CQ9BQE3 449 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 UCK2Q9BZX2 261 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 MKLN1Q9UL63 735 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 A4GNTQ9UNA3 340 aa15.84■□□□□ 0.13
PHGDH-234ENST00000642041 SH3PXD2BA1X283 911 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 TO15178 435 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 OR10H3O60404 316 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 SMNDC1O75940 238 aaKnown RBP eCLIP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 DIRAS1O95057 198 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 MED26O95402 600 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 RECKO95980 971 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 IGHEP01854 428 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 CT62P0C5K7 136 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 OSMP13725 252 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 CBLP22681 906 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 DLSTP36957 453 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 OR1D4P47884 311 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 ISL1P61371 349 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 EEF1A1P68104 462 aaKnown RBP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 BTG2P78543 158 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 GPR68Q15743 365 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 ZIK1Q3SY52 487 aaPredicted RBP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 NKAIN1Q4KMZ8 207 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 FGD3Q5JSP0 725 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 C6orf141Q5SZD1 244 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 RPL13AP3Q6NVV1 102 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 C1orf94Q6P1W5 598 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 P3H2Q8IVL5 708 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 OR8K3Q8NH51 312 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 FBLIM1Q8WUP2 373 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 ACOT11Q8WXI4 607 aaPredicted RBP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 LCORQ96JN0 433 aaPredicted RBP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 MCHR1Q99705 422 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 RIBC2Q9H4K1 309 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 NECTIN3Q9NQS3 549 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 UBQLN4Q9NRR5 601 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 SELENONQ9NZV5 590 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 DHCR7Q9UBM7 475 aaKnown RBP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 GPN3Q9UHW5 284 aaPredicted RBP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 ERVK-19Q9WJR5 959 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 TMEM5Q9Y2B1 443 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 PCDHGA9Q9Y5G4 932 aaKnown RBP15.83■□□□□ 0.12
PHGDH-234ENST00000642041 CLDN16Q9Y5I7 305 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 KCNE3Q9Y6H6 103 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 MAU2Q9Y6X3 613 aa15.83■□□□□ 0.12
PHGDH-234ENST00000642041 TACC2O95359 2948 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 A0A1W2PS29 197 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 CDC14CA4D256 554 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 SH3D21A4FU49 640 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 TRAPPC13A5PLN9 417 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 CDHR4A6H8M9 788 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 TRIM64CA6NLI5 447 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 FCMRO60667 390 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 ABCB7O75027 752 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 NME6O75414 186 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 NGFRP08138 427 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 HPGDP15428 266 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 SOX18P35713 384 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 RPP38P78345 283 aaKnown RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 IL1RL1Q01638 556 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 EXOSC7Q15024 291 aaKnown RBP15.82■□□□□ 0.12
PHGDH-234ENST00000642041 TMEM44Q2T9K0 475 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 PLEKHM3Q6ZWE6 761 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 MCEMP1Q8IX19 187 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 SLC5A8Q8N695 610 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 OR5L2Q8NGL0 311 aa15.82■□□□□ 0.12
PHGDH-234ENST00000642041 OR6T1Q8NGN1 323 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms