RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 MED22Q15528 200 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 NSDHLQ15738 373 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 SPATS1Q496A3 300 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 FHL5Q5TD97 284 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 SAXO2Q658L1 398 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 DGAT2L7PQ6IED9 249 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 FAM111BQ6SJ93 734 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 DGAT2L6Q6ZPD8 337 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 HPS6Q86YV9 775 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 OR2L13Q8N349 312 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 FBXW8Q8N3Y1 598 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 PLPP5Q8NEB5 264 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 C7orf57Q8NEG2 295 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 OR7G2Q8NG99 324 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 PNPT1Q8TCS8 783 aaKnown RBP7.37□□□□□ -1.23
SCARB2-220ENST00000640076 SFXN5Q8TD22 340 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 CTHRC1Q96CG8 243 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 SLC46A1Q96NT5 459 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 RAB3IPQ96QF0 476 aaPredicted RBP7.37□□□□□ -1.23
SCARB2-220ENST00000640076 ECSITQ9BQ95 431 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 PELOQ9BRX2 385 aaKnown RBP7.37□□□□□ -1.23
SCARB2-220ENST00000640076 KLHL4Q9C0H6 718 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 LDAHQ9H6V9 325 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 ANKRA2Q9H9E1 313 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 C3orf14Q9HBI5 128 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 ZCCHC3Q9NUD5 404 aaKnown RBP7.37□□□□□ -1.23
SCARB2-220ENST00000640076 NTMQ9P121 344 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 PTGFRNQ9P2B2 879 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 SLC7A8Q9UHI5 535 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 TRAV6A0A075B6T7 132 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 EMC8O43402 210 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 IFNA16P05015 189 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 HSD17B1P14061 328 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 THBS2P35442 1172 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 GSK3BP49841 420 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 PRR5P85299 388 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 TP53BP2Q13625 1128 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 RGNQ15493 299 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 TRMT12Q53H54 448 aaKnown RBP7.37□□□□□ -1.23
SCARB2-220ENST00000640076 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.37□□□□□ -1.23
SCARB2-220ENST00000640076 BHLHB9Q6PI77 547 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 C6orf120Q7Z4R8 191 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 SERPINA11Q86U17 422 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 CALHM3Q86XJ0 350 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 RNF130Q86XS8 419 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 OR56A1Q8NGH5 318 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 OR10A6Q8NH74 314 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 DOK4Q8TEW6 326 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 RIT1Q92963 219 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 MOAP1Q96BY2 351 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 CCDC124Q96CT7 223 aaKnown RBP7.37□□□□□ -1.23
SCARB2-220ENST00000640076 MAGED4Q96JG8 741 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 ZNF583Q96ND8 569 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 TEX12Q9BXU0 123 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 PCDHB16Q9NRJ7 776 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 DKK4Q9UBT3 224 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 ZNF639Q9UID6 485 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 C3orf18Q9UK00 162 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 AP3M1Q9Y2T2 418 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 CEP295Q9C0D2 2601 aa7.37□□□□□ -1.23
SCARB2-220ENST00000640076 LOC102723971A0A1B0GUV8 181 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 CDRT15L2A8MXV6 281 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 J3KTA2 159 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 KLF7O75840 302 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 PSMG1O95456 288 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 HMGN2P05204 90 aaKnown RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 CYC1P08574 325 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 TCN1P20061 433 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 S1PR1P21453 382 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 ME2P23368 584 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 MSX2P35548 267 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 ACAA2P42765 397 aaKnown RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 HAAOP46952 286 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 GZMMP51124 257 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 PRKAG1P54619 331 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 EMP2P54851 167 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 CASP9P55211 416 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 KCNJ10P78508 379 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 CD69Q07108 199 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 AIMP2Q13155 320 aaKnown RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 ELAVL1Q15717 326 aaKnown RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 LANCL3Q6ZV70 420 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 IFNEQ86WN2 208 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 NUP43Q8NFH3 380 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 OR52N2Q8NGI0 321 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 CT55Q8WUE5 264 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 PTPMT1Q8WUK0 201 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 WDR60Q8WVS4 1066 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 MS4A4EQ96PG1 132 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 MS4A7Q9GZW8 240 aaPredicted RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 RAD21L1Q9H4I0 556 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 SERHL2Q9H4I8 314 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 ADAP2Q9NPF8 381 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 ASCL3Q9NQ33 180 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 PNO1Q9NRX1 252 aaKnown RBP7.36□□□□□ -1.23
SCARB2-220ENST00000640076 USP22Q9UPT9 525 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 AKAP13Q12802 2813 aa7.36□□□□□ -1.23
SCARB2-220ENST00000640076 C17orf105B2RV13 164 aa7.35□□□□□ -1.23
SCARB2-220ENST00000640076 HRKO00198 91 aa7.35□□□□□ -1.23
SCARB2-220ENST00000640076 PEX12O00623 359 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms