RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ZNF561Q8N587 486 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 TMEM161AQ9NX61 479 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 ARL15Q9NXU5 204 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 ASH2LQ9UBL3 628 aa11.21□□□□□ -0.62
CAPN3-221ENST00000638141 A0A1B0GVC2 190 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 A0A1W2PRQ8 180 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 A6NIN4 97 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 BLOC1S5-TXNDC5H3BN57 136 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 GABARAPH6UMI1 98 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 AOAHP28039 575 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 SHC1P29353 583 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 CCR7P32248 378 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 OPRD1P41143 372 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 RPIAP49247 311 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 ARFIP1P53367 373 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 MRPS10P82664 201 aaKnown RBP11.2□□□□□ -0.62
CAPN3-221ENST00000638141 DUSP4Q13115 394 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 SLC5A12Q1EHB4 618 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 MFSD14CQ5VZR4 134 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 SFRP4Q6FHJ7 346 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-221ENST00000638141 REEP3Q6NUK4 255 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 C1orf94Q6P1W5 598 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 CFAP206Q8IYR0 622 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 KCNRGQ8N5I3 272 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 LKAAEAR1Q8TD35 194 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 ZFP3Q96NJ6 502 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 SLC12A9Q9BXP2 914 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 ABCG8Q9H221 673 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 ABHD14A-ACY1A0A1B0GW23 586 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 KDELR3O43731 214 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 ICOSLGO75144 302 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 TMEM127O75204 238 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 NME6O75414 186 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-221ENST00000638141 CNMDO75829 334 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 IGLV3-27P01718 113 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 MPC1LP0DKB6 136 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 HPGDP15428 266 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 LAP3P28838 519 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 SLC6A11P48066 632 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 CSNK1EP49674 416 aaKnown RBP11.2□□□□□ -0.62
CAPN3-221ENST00000638141 ART1P52961 327 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 PNLIPRP1P54315 467 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 H2BFSP57053 126 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 HENMT1Q5T8I9 393 aaKnown RBP11.2□□□□□ -0.62
CAPN3-221ENST00000638141 RPL13AP3Q6NVV1 102 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 C17orf99Q6UX52 265 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF813Q6ZN06 617 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 OR2W3Q7Z3T1 314 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 DNAAF1Q8NEP3 725 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 NR4A3Q92570 626 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 MRPL38Q96DV4 380 aaKnown RBP11.2□□□□□ -0.62
CAPN3-221ENST00000638141 WRAP53Q9BUR4 548 aaKnown RBP11.2□□□□□ -0.62
CAPN3-221ENST00000638141 FBXO44Q9H4M3 255 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 MED17Q9NVC6 651 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 PCDHB10Q9UN67 800 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 RCE1Q9Y256 329 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 NINQ8N4C6 2090 aa11.2□□□□□ -0.62
CAPN3-221ENST00000638141 TRAV1-2A0A0B4J238 106 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 MBLAC1A4D2B0 266 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 MGAT4DA6NG13 374 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 TERTO14746 1132 aaKnown RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 FGF16O43320 207 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 F11P03951 625 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 RCC1P18754 421 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ABCD3P28288 659 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 TRHRP34981 398 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 CDH11P55287 796 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 BLOC1S1P78537 153 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 SLC3A1Q07837 685 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 MELKQ14680 651 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 DNLZQ5SXM8 178 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 AADACL4Q5VUY2 407 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 SSX9Q7RTT3 188 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 SLC36A1Q7Z2H8 476 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 OR2AK2Q8NG84 335 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 SLC7A13Q8TCU3 470 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 OSTF1Q92882 214 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 WDR89Q96FK6 387 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 SMG9Q9H0W8 520 aaKnown RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 REEP4Q9H6H4 257 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 A4GALTQ9NPC4 353 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 MRPL17Q9NRX2 175 aaKnown RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ACSS1Q9NUB1 689 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 DHCR7Q9UBM7 475 aaKnown RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 LRFN2Q9ULH4 789 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 TIMM13Q9Y5L4 95 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-221ENST00000638141 DOCK3Q8IZD9 2030 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ANKRD20A5PA0PJZ0 165 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 TMEM200CA6NKL6 621 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 WASH3PC4AMC7 463 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 H0YIV9 168 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 J3QRE1 110 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 DVL2O14641 736 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 GPR37L1O60883 481 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 UBXN7O94888 489 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 OR2F2O95006 317 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 ATP1B1P05026 303 aa11.19□□□□□ -0.62
CAPN3-221ENST00000638141 GKN3PP0CG01 181 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms