RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 ZNF556Q9HAH1 456 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 ATP13A2Q9NQ11 1180 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 CTPS2Q9NRF8 586 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 SDHAF3Q9NRP4 125 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 KIF17Q9P2E2 1029 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 RPS6KB2Q9UBS0 482 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 TMEFF2Q9UIK5 374 aaPredicted RBP10.78□□□□□ -0.68
CLN6-223ENST00000637823 MGAT4BQ9UQ53 548 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 CARD8Q9Y2G2 431 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 SSUH2Q9Y2M2 353 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 AP4B1Q9Y6B7 739 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 CPAMD8Q8IZJ3 1885 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 MPDZO75970 2070 aa10.78□□□□□ -0.68
CLN6-223ENST00000637823 H0YAE9 185 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 OIP5O43482 229 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 LYPD3O95274 346 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 SNAP29O95721 258 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 THY1P04216 161 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 CBLP22681 906 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 IGFBP5P24593 272 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 IFNGR2P38484 337 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 SOX3P41225 446 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 COPZ1P61923 177 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 C17orf67Q0P5P2 114 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 MERTKQ12866 999 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 FOXD4Q12950 439 aaPredicted RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 AIMP2Q13155 320 aaKnown RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 SEC23BQ15437 767 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 NDUFAF6Q330K2 333 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 DCAF10Q5QP82 559 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 C6orf52Q5T4I8 152 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 WLSQ5T9L3 541 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 ANKRD34AQ69YU3 496 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 ZNF770Q6IQ21 691 aaPredicted RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 RRM2BQ7LG56 351 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 DUSP19Q8WTR2 217 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 DNAJA4Q8WW22 397 aaPredicted RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 ACOT11Q8WXI4 607 aaPredicted RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 TFAP2CQ92754 450 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 NAF1Q96HR8 494 aaKnown RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 THOC3Q96J01 351 aaKnown RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 HS6ST2Q96MM7 605 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 SECISBP2Q96T21 854 aaKnown RBP10.77□□□□□ -0.69
CLN6-223ENST00000637823 RTN4RQ9BZR6 473 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 KRT84Q9NSB2 600 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 SELENONQ9NZV5 590 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 SLC7A7Q9UM01 511 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 POFUT2Q9Y2G5 429 aa10.77□□□□□ -0.69
CLN6-223ENST00000637823 A0A087WUU8 490 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 A0A0B4J2E0 115 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 A0A1B0GWA3 101 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 A0A1B0GX12 115 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 MASP2O00187 686 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 HCRTR2O43614 444 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 SCO2O43819 266 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 OR10H3O60404 316 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ADAM11O75078 769 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 OR6B1O95007 311 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 GASTP01350 101 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 RYKP34925 604 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 CAPGP40121 348 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 P2RX1P51575 399 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 GAS1P54826 345 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ADARB1P78563 741 aaKnown RBP10.76□□□□□ -0.69
CLN6-223ENST00000637823 ZNF117Q03924 483 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 SNTA1Q13424 505 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 MED21Q13503 144 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 MEP1AQ16819 746 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 TBC1D25Q3MII6 688 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ZIK1Q3SY52 487 aaPredicted RBP10.76□□□□□ -0.69
CLN6-223ENST00000637823 SLC36A3Q495N2 470 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ACER2Q5QJU3 275 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 SWT1Q5T5J6 900 aaKnown RBP10.76□□□□□ -0.69
CLN6-223ENST00000637823 TTC23Q5W5X9 447 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 FCRLBQ6BAA4 426 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 WBP2NLQ6ICG8 309 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 TMEM81Q6P7N7 255 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ULK3Q6PHR2 472 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 IL20RBQ6UXL0 311 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 LINC00114Q6XXX2 140 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ZNF730Q6ZMV8 503 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 NKAIN4Q8IVV8 208 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 APLFQ8IW19 511 aaPredicted RBP10.76□□□□□ -0.69
CLN6-223ENST00000637823 RNF113BQ8IZP6 322 aaKnown RBP10.76□□□□□ -0.69
CLN6-223ENST00000637823 TMEM156Q8N614 296 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 TMCO5AQ8N6Q1 288 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ZNF555Q8NEP9 628 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 OR10G3Q8NGC4 313 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 OR4K5Q8NGD3 323 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 OR9Q2Q8NGE9 314 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 CYGBQ8WWM9 190 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 THAP4Q8WY91 577 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 PSMF1Q92530 271 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 MPP4Q96JB8 637 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 CCNL2Q96S94 520 aaPredicted RBP10.76□□□□□ -0.69
CLN6-223ENST00000637823 PRSS27Q9BQR3 290 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 ADI1Q9BV57 179 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 DGCR6LQ9BY27 220 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 LHPPQ9H008 270 aa10.76□□□□□ -0.69
CLN6-223ENST00000637823 TOR3AQ9H497 397 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms