RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SDF2Q99470 211 aa17■□□□□ 0.31
CLN6-221ENST00000637494 NMUR2Q9GZQ4 415 aa17■□□□□ 0.31
CLN6-221ENST00000637494 CXXC4Q9H2H0 198 aa17■□□□□ 0.31
CLN6-221ENST00000637494 MEAF6Q9HAF1 191 aa17■□□□□ 0.31
CLN6-221ENST00000637494 KLHL28Q9NXS3 571 aa17■□□□□ 0.31
CLN6-221ENST00000637494 CCDC168Q8NDH2 2452 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 A0A0J9YW62 118 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 TRPC5OSA6NMA1 111 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 ZNF195O14628 629 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 SS18L1O75177 396 aaPredicted RBP16.99■□□□□ 0.31
CLN6-221ENST00000637494 S100A3P33764 101 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 CHI3L1P36222 383 aaPredicted RBP16.99■□□□□ 0.31
CLN6-221ENST00000637494 SLC6A8P48029 635 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 RNF144AP50876 292 aaPredicted RBP16.99■□□□□ 0.31
CLN6-221ENST00000637494 RIPPLY3P57055 190 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 HPCAP84074 193 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 BST1Q10588 318 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 MPP2Q14168 576 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 GUSBP1Q15486 140 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 CTU2Q2VPK5 515 aaKnown RBP16.99■□□□□ 0.31
CLN6-221ENST00000637494 ARHGAP11BQ3KRB8 267 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 ATG16L1Q676U5 607 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 CBLN3Q6UW01 205 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 POC1BQ8TC44 478 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 CPNE4Q96A23 557 aaPredicted RBP16.99■□□□□ 0.31
CLN6-221ENST00000637494 MBD6Q96DN6 1003 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 ADGRG7Q96K78 797 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 MRGPRX4Q96LA9 322 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 WFIKKN1Q96NZ8 548 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 NPAS1Q99742 590 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 KLHL4Q9C0H6 718 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 OR51I1Q9H343 314 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 PLSCR4Q9NRQ2 329 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 PNPOQ9NVS9 261 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 NKIRAS1Q9NYS0 192 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 ICAM5Q9UMF0 924 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 CLEC4AQ9UMR7 237 aa16.99■□□□□ 0.31
CLN6-221ENST00000637494 PCNX3Q9H6A9 2034 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 SERINC4A6NH21 518 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 E9PBE3 544 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 CYP7B1O75881 506 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 CD99P14209 185 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 PPP3CBP16298 524 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 SLC7A1P30825 629 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 KHKP50053 298 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 ANXA11P50995 505 aaKnown RBP16.98■□□□□ 0.31
CLN6-221ENST00000637494 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLN6-221ENST00000637494 PDZK1Q5T2W1 519 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 BEND4Q6ZU67 534 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 SPATA19Q7Z5L4 167 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 ANKRD46Q86W74 232 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 TRIML2Q8N7C3 387 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 OR5W2Q8NH69 310 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 MIPOL1Q8TD10 442 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 GPR119Q8TDV5 335 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 OIT3Q8WWZ8 545 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 ZBTB18Q99592 522 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 PLEKHF2Q9H8W4 249 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 THAP1Q9NVV9 213 aa16.98■□□□□ 0.31
CLN6-221ENST00000637494 TMEM120BA0PK00 339 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 NPIPB9F8W1W9 429 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 SLCO1B7G3V0H7 640 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 CSTAP01040 98 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 IL11P20809 199 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 LRRC74AQ0VAA2 488 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 SELENBP1Q13228 472 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 RNPS1Q15287 305 aaKnown RBP16.97■□□□□ 0.31
CLN6-221ENST00000637494 ZNF141Q15928 474 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 TMEM176BQ3YBM2 270 aaPredicted RBP16.97■□□□□ 0.31
CLN6-221ENST00000637494 FAM174BQ3ZCQ3 159 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 SPANXN4Q5MJ08 99 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 TMEM201Q5SNT2 666 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 OGFOD2Q6N063 350 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 EIF3MQ7L2H7 374 aaKnown RBP16.97■□□□□ 0.31
CLN6-221ENST00000637494 CLEC4FQ8N1N0 589 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 ATP6V1C2Q8NEY4 427 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 RAB3IL1Q8TBN0 382 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 MGARPQ8TDB4 240 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 XAGE5Q8WWM1 108 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 PIK3IP1Q96FE7 263 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 POLE3Q9NRF9 147 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 SERINC1Q9NRX5 453 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 MARCOQ9UEW3 520 aaPredicted RBP16.97■□□□□ 0.31
CLN6-221ENST00000637494 MKLN1Q9UL63 735 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 WDR45Q9Y484 360 aa16.97■□□□□ 0.31
CLN6-221ENST00000637494 HDAC3O15379 428 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 OIP5O43482 229 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 ATE1O95260 518 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 OR12D1P0DN82 309 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 PRKCAP17252 672 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 PGCP20142 388 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 CRYGSP22914 178 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 CASP8Q14790 479 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 QPRTQ15274 297 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 ZNF239Q16600 458 aaKnown RBP16.96■□□□□ 0.31
CLN6-221ENST00000637494 DEFB113Q30KQ7 82 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 NDUFAF6Q330K2 333 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 TGIF2LYQ8IUE0 185 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 ZFP90Q8TF47 636 aa16.96■□□□□ 0.31
CLN6-221ENST00000637494 TMEM234Q8WY98 164 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms