RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 KDELR2P33947 212 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 RPP38P78345 283 aaKnown RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 OR1C1Q15619 314 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 MAPK14Q16539 360 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 PDZK1Q5T2W1 519 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 TTC23Q5W5X9 447 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SPINK14Q6IE38 97 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 CCDC80Q76M96 950 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 MDGA2Q7Z553 956 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ARMC8Q8IUR7 673 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF786Q8N393 782 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF527Q8NB42 609 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 OR52P1PQ8NH57 321 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SGCZQ96LD1 299 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SMAD5Q99717 465 aaKnown RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ARHGAP9Q9BRR9 750 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 TBL1XR1Q9BZK7 514 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 METTL7AQ9H8H3 244 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 NTN4Q9HB63 628 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 KLRF1Q9NZS2 232 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 DNAJB9Q9UBS3 223 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 KCNE5Q9UJ90 142 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 PCDHGA9Q9Y5G4 932 aaKnown RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 GPC6Q9Y625 555 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 DSPPQ9NZW4 1301 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ATRXP46100 2492 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 A0A1B0GVG6 124 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SH3PXD2BA1X283 911 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 OR5H15A6NDH6 313 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 AGAP5A6NIR3 686 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SCO2O43819 266 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 IFNA14P01570 189 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 DBIP07108 87 aaKnown RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 GNAO1P09471 354 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 FAM87AP0C7U9 286 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 CCL3P10147 92 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 IL7RP16871 459 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 TBXA2RP21731 343 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 EVI2BP34910 448 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 CLK3P49761 638 aaKnown RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 TOP3AQ13472 1001 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 RFX4Q33E94 735 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF311Q5JNZ3 666 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 PRAMEF20Q5VT98 475 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SLC22A10Q63ZE4 541 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 BICRALQ6AI39 1079 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 MARCH3Q86UD3 253 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 VRK2Q86Y07 508 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 GATSQ8NAP1 163 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SMYD1Q8NB12 490 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 TM9SF4Q92544 642 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 HDAC2Q92769 488 aaKnown RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 HAS2Q92819 552 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 PMM1Q92871 262 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 TAMM41Q96BW9 452 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 BBC3Q96PG8 261 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SIGLEC12Q96PQ1 595 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SPATA5L1Q9BVQ7 753 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 RNF32Q9H0A6 362 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 TRIM45Q9H8W5 580 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 SEC14L3Q9UDX4 400 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF232Q9UNY5 417 aa13.23□□□□□ -0.29
LINC00339-208ENST00000634934 CHCHD2Q9Y6H1 151 aaPredicted RBP13.23□□□□□ -0.29
LINC00339-208ENST00000634934 PRAMEF25A6NGN4 478 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 G3V3Y1 287 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 FADS1O60427 444 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 SLC25A12O75746 678 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 SEC14L2O76054 403 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 SERPINA1P01009 418 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 P04436 131 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 CHRNB3Q05901 458 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 LY6DQ14210 128 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 LARS2Q15031 903 aaKnown RBP13.22□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF141Q15928 474 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 KLHL26Q53HC5 615 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 IGFL2Q6UWQ7 119 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 APOOLQ6UXV4 268 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 CNTRLQ7Z7A1 2325 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF227Q86WZ6 799 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 POGLUT1Q8NBL1 392 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 OR13F1Q8NGS4 319 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 GRHL3Q8TE85 626 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 PAQR8Q8TEZ7 354 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 TMIGD2Q96BF3 282 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 SECISBP2Q96T21 854 aaKnown RBP13.22□□□□□ -0.29
LINC00339-208ENST00000634934 ABCG2Q9UNQ0 655 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF443Q9Y2A4 671 aaPredicted RBP13.22□□□□□ -0.29
LINC00339-208ENST00000634934 IFT52Q9Y366 437 aa13.22□□□□□ -0.29
LINC00339-208ENST00000634934 KALRNO60229 2985 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 C2orf72A6NCS6 295 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 SERINC4A6NH21 518 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 CLDN24A6NM45 220 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 CDK2AP1O14519 115 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 MRPS14O60783 128 aaKnown RBP13.21□□□□□ -0.29
LINC00339-208ENST00000634934 NEURL1O76050 574 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 MFN2O95140 757 aa13.21□□□□□ -0.29
LINC00339-208ENST00000634934 ZNF682O95780 498 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms