RNA–Protein interactions for RNA: ENST00000633899.1

SF1-221, Transcript of splicing factor 1, humanhuman

TSL 4

Gene SF1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-221ENST00000633899 KCNE5Q9UJ90 142 aa18.82■□□□□ 0.6
SF1-221ENST00000633899 SLC35A3Q9Y2D2 325 aa18.82■□□□□ 0.6
SF1-221ENST00000633899 L3MBTL1Q9Y468 752 aa18.82■□□□□ 0.6
SF1-221ENST00000633899 CACNA1DQ01668 2161 aa18.82■□□□□ 0.6
SF1-221ENST00000633899 A0A096LPI6 279 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 SLC22A20A6NK97 555 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 CYSRT1A8MQ03 144 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 EIF1AYO14602 144 aaKnown RBP18.81■□□□□ 0.6
SF1-221ENST00000633899 LINGO3P0C6S8 592 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 UBTFL6P0CB48 400 aaPredicted RBP18.81■□□□□ 0.6
SF1-221ENST00000633899 SUCLG1P53597 346 aaKnown RBP18.81■□□□□ 0.6
SF1-221ENST00000633899 CLDN20P56880 219 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 FOXF1Q12946 379 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 FGFBP1Q14512 234 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 LRRC74BQ6ZQY2 392 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 ADGRE4PQ86SQ3 457 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 FUNDC1Q8IVP5 155 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 OR5W2Q8NH69 310 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 AURKBQ96GD4 344 aaPredicted RBP18.81■□□□□ 0.6
SF1-221ENST00000633899 LAT2Q9GZY6 243 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 CACYBPQ9HB71 228 aaKnown RBP18.81■□□□□ 0.6
SF1-221ENST00000633899 CALML5Q9NZT1 146 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 PCDHB14Q9Y5E9 798 aa18.81■□□□□ 0.6
SF1-221ENST00000633899 GPC6Q9Y625 555 aaPredicted RBP18.81■□□□□ 0.6
SF1-221ENST00000633899 CENPVL1A0A0U1RR11 272 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 PRAMEF27A3QJZ7 478 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 H0YC42 278 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 CLIC1O00299 241 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 RCBTB2O95199 551 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 ETFAP13804 333 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 EIF1AXP47813 144 aaKnown RBP18.8■□□□□ 0.6
SF1-221ENST00000633899 TPD52P55327 224 aaPredicted RBP18.8■□□□□ 0.6
SF1-221ENST00000633899 RAC1P63000 192 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 GUCY1A3Q02108 690 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 GNA13Q14344 377 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 MAPK14Q16539 360 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 PDSS1Q5T2R2 415 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 OR2A2Q6IF42 318 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 PLXDC2Q6UX71 529 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 HMGN2P46Q86SG4 172 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 FBXO27Q8NI29 283 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 GPR119Q8TDV5 335 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 INTS12Q96CB8 462 aaKnown RBP18.8■□□□□ 0.6
SF1-221ENST00000633899 TMEM120AQ9BXJ8 343 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 PRRG4Q9BZD6 226 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 PAIP1Q9H074 479 aaKnown RBP18.8■□□□□ 0.6
SF1-221ENST00000633899 TMEM185BQ9H7F4 350 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 FGFR1OP2Q9NVK5 253 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 CRYBG3Q68DQ2 2970 aa18.8■□□□□ 0.6
SF1-221ENST00000633899 PKDREJQ9NTG1 2253 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 EEF1E1-BLOC1S5C9J1V9 151 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 EEF1E1O43324 174 aaKnown RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 CHRM4P08173 479 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 PGCP20142 388 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 CAPN3P20807 821 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 ELK4P28324 431 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 ADH6P28332 368 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 ASCL1P50553 236 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 AGFG1P52594 562 aaKnown RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 CRISP3P54108 245 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 CLDN15P56746 228 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 TFF3Q07654 80 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 SKP2Q13309 424 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 QPRTQ15274 297 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 METTL25Q8N6Q8 603 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 RELL2Q8NC24 303 aaPredicted RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 POC1BQ8TC44 478 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 WDR60Q8WVS4 1066 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 TMEM234Q8WY98 164 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 ARSGQ96EG1 525 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 MRGPRX4Q96LA9 322 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 NPAS1Q99742 590 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 SPOCK3Q9BQ16 436 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 KLHDC3Q9BQ90 382 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 THUMPD3Q9BV44 507 aaKnown RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 SFXN3Q9BWM7 321 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 QRSL1Q9H0R6 528 aaKnown RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 SLC38A1Q9H2H9 487 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 MTHFD2LQ9H903 347 aaPredicted RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 NPDC1Q9NQX5 325 aaPredicted RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 PAQR5Q9NXK6 330 aaPredicted RBP18.79■□□□□ 0.6
SF1-221ENST00000633899 ZNF175Q9Y473 711 aa18.79■□□□□ 0.6
SF1-221ENST00000633899 GJE1A6NN92 205 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 ANGPT2O15123 496 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 TGM6O95932 706 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 IL18BPO95998 194 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 OPN1LWP04000 364 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 BCHEP06276 602 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 FCGR2AP12318 317 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 IL7RP16871 459 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 PPIBP23284 216 aaKnown RBP18.78■□□□□ 0.6
SF1-221ENST00000633899 PSMA4P25789 261 aaKnown RBP18.78■□□□□ 0.6
SF1-221ENST00000633899 UQCRC1P31930 480 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 SFTPDP35247 375 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 ARFIP2P53365 341 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 EEF1A1P68104 462 aaKnown RBP18.78■□□□□ 0.6
SF1-221ENST00000633899 KCNJ10P78508 379 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 FADDQ13158 208 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 PON3Q15166 354 aa18.78■□□□□ 0.6
SF1-221ENST00000633899 TOMM34Q15785 309 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms