RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 VASNQ6EMK4 673 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SERPINA12Q8IW75 414 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 OR14K1Q8NGZ2 314 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SYNPRQ8TBG9 265 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 CACNG6Q9BXT2 260 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 INIPQ9NRY2 104 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SERTAD4Q9NUC0 356 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 ANTXRLA6NF34 631 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 TIMM8AO60220 97 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 ICAM2P13598 275 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 GJA5P36382 358 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 GPR26Q8NDV2 337 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SNX18Q96RF0 628 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 FOLH1BQ9HBA9 442 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 CCDC88CQ9P219 2028 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 LAMA4Q16363 1823 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 ONECUT3O60422 494 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 FOXD2O60548 495 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 DNAJB5O75953 348 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 TSPAN15O95858 294 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 MMP21Q8N119 569 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 FRZBQ92765 325 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 RAB39BQ96DA2 213 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 BTBD2Q9BX70 525 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SLC25A18Q9H1K4 315 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 KLHL42Q9P2K6 505 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 ZNF443Q9Y2A4 671 aaPredicted RBP11.04□□□□□ -0.64
SHPRH-211ENST00000629427 ZNF337Q9Y3M9 751 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 TRAV27A0A087WT01 109 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 E7ESA3 106 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 TRAPPC2LH3BP13 241 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 DVL2O14641 736 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 OR2T1O43869 369 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 ARHGEF15O94989 841 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 C7P10643 843 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 NUDT1P36639 197 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 OR52W1Q6IF63 320 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 PFDN5Q99471 154 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SPIN2AQ99865 258 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SPIN2BQ9BPZ2 258 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
SHPRH-211ENST00000629427 CD300LBA8K4G0 201 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 GYPBP06028 91 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 RUNX2Q13950 521 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 PM20D1Q6GTS8 502 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 SBSNQ6UWP8 590 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 HTR3DQ70Z44 454 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ZC3H3Q8IXZ2 948 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 SLC46A2Q9BY10 475 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 UBFD1O14562 309 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ALDOBP05062 364 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 BDKRB2P30411 391 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 BMXP51813 675 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 CYCSP99999 105 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 AGAP7PQ5VUJ5 663 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 AGAP6Q5VW22 663 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 FBXW12Q6X9E4 464 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 GTPBP8Q8N3Z3 284 aaPredicted RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 PAPD5Q8NDF8 572 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 CHFRQ96EP1 664 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 AGAP4Q96P64 663 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 HSPE1-MOB4S4R3N1 261 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 SCRG1O75711 98 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 IDUAP35475 653 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 WNT4P56705 351 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 PCBD1P61457 104 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 TCEAL1Q15170 157 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 SFRP5Q5T4F7 317 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 GARNL3Q5VVW2 1013 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 C7orf43Q8WVR3 580 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 C4orf36Q96KX1 117 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 OR7D2Q96RA2 312 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ZNF355PQ9NSJ1 428 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 TAF1P21675 1872 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 RRP8O43159 456 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 MRPL33O75394 65 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 IGHG1P01857 330 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 CAPNS1P04632 268 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 PROZP22891 400 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 PARS2Q7L3T8 475 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 SLC39A11Q8N1S5 342 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 RNF175Q8N4F7 328 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 MDGA1Q8NFP4 955 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 GIMAP5Q96F15 307 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 VRK1Q99986 396 aaPredicted RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 FUNDC2Q9BWH2 189 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 DECR2Q9NUI1 292 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 CBLCQ9ULV8 474 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ZNF736B4DX44 427 aaPredicted RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ATP6V1G1O75348 118 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 RAB3DO95716 219 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 GABARAPL2P60520 117 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 CXCR4P61073 352 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 NCS1P62166 190 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 MRPS21P82921 87 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 EXOSC6Q5RKV6 272 aaKnown RBP11.03□□□□□ -0.64
SHPRH-211ENST00000629427 MKXQ8IYA7 352 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 PSMF1Q92530 271 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ARRDC3Q96B67 414 aa11.03□□□□□ -0.64
SHPRH-211ENST00000629427 ZNF775Q96BV0 537 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms