RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 ZNF550Q7Z398 422 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 LSRQ86X29 649 aaPredicted RBP9.49□□□□□ -0.89
ATRX-216ENST00000624403 APLFQ8IW19 511 aaPredicted RBP9.49□□□□□ -0.89
ATRX-216ENST00000624403 SLC34A3Q8N130 599 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 ZNF527Q8NB42 609 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 APCDD1LQ8NCL9 501 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 PIGXQ8TBF5 258 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 TMEM255BQ8WV15 326 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 OIT3Q8WWZ8 545 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 SLC35B4Q969S0 331 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 C8orf44Q96CB5 159 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 HSPBAP1Q96EW2 488 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 ADOQ96SZ5 270 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 ADNPQ9H2P0 1102 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 LIN28AQ9H9Z2 209 aaKnown RBP9.49□□□□□ -0.89
ATRX-216ENST00000624403 TMEM27Q9HBJ8 222 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 NCDNQ9UBB6 729 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 C19orf25Q9UFG5 118 aaPredicted RBP9.49□□□□□ -0.89
ATRX-216ENST00000624403 PISDQ9UG56 409 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 RNF6Q9Y252 685 aa9.49□□□□□ -0.89
ATRX-216ENST00000624403 CCDC88CQ9P219 2028 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 TRBV11-1A0A0K0K1C0 115 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 A0A1B0GWA3 101 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 SLC1A7O00341 560 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 SCDO00767 359 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 ICOSLGO75144 302 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 STK17BO94768 372 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 UMODP07911 640 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 GSTM3P21266 225 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 TBXA2RP21731 343 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 MSX1P28360 303 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 IL12BP29460 328 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 FMO3P31513 532 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 KRT20P35900 424 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 RPL5P46777 297 aaKnown RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 IDH2P48735 452 aaKnown RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 SLC26A5P58743 744 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 TUBA4AP68366 448 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 ALDH6A1Q02252 535 aaKnown RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 COX10Q12887 443 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 NCF4Q15080 339 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 PTGES3Q15185 160 aaKnown RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 CD226Q15762 336 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 SLX4IPQ5VYV7 408 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 ZNF613Q6PF04 617 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 APOOLQ6UXV4 268 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 HSDL2Q6YN16 418 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 ZNF517Q6ZMY9 492 aaPredicted RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 RRM2BQ7LG56 351 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 PIP4P1Q86T03 277 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 NRMQ8IXM6 262 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 ENTHD1Q8IYW4 607 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 GATSQ8NAP1 163 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 FAM71CQ8NEG0 241 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 C17orf47Q8NEP4 570 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 BPIFB6Q8NFQ5 453 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 FAM81AQ8TBF8 368 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 GRHL3Q8TE85 626 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 APH1BQ8WW43 257 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 ZNF566Q969W8 418 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 TP53INP1Q96A56 240 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 OMA1Q96E52 524 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 VMP1Q96GC9 406 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 LIN37Q96GY3 246 aaPredicted RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 FAM46AQ96IP4 442 aaKnown RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 TAAR9Q96RI9 348 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 LPAR4Q99677 370 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 DDA1Q9BW61 102 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 TRIM2Q9C040 744 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 RASSF1Q9NS23 344 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 TUBA8Q9NY65 449 aaPredicted RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 ZNF226Q9NYT6 803 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 SLC35A3Q9Y2D2 325 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 PTRH2Q9Y3E5 179 aaKnown RBP9.48□□□□□ -0.89
ATRX-216ENST00000624403 PCDHGA1Q9Y5H4 931 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 TTC28Q96AY4 2481 aa9.48□□□□□ -0.89
ATRX-216ENST00000624403 LOC102723996A0A087X1L8 192 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 A0A0B4J2E0 115 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 A0A1B0GX12 115 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 A0A1W2PNU3 283 aaPredicted RBP9.47□□□□□ -0.89
ATRX-216ENST00000624403 H3BN98 237 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 M0R129 80 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 KLF4O43474 513 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 LRP3O75074 770 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 WBP4O75554 376 aaKnown RBP9.47□□□□□ -0.89
ATRX-216ENST00000624403 KLF7O75840 302 aaPredicted RBP9.47□□□□□ -0.89
ATRX-216ENST00000624403 ANGPTL1O95841 491 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 LINGO3P0C6S8 592 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 CCDC159P0C7I6 412 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 JMJD7P0C870 316 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 UBL4AP11441 157 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 HPGDP15428 266 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 PTNP21246 168 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 TGM1P22735 817 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 EEF1B2P24534 225 aaKnown RBP9.47□□□□□ -0.89
ATRX-216ENST00000624403 FPR3P25089 353 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 ABCD3P28288 659 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 ADH7P40394 386 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 STAT5AP42229 794 aa9.47□□□□□ -0.89
ATRX-216ENST00000624403 GPR4P46093 362 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms