RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 HOXD1Q9GZZ0 328 aa17.06■□□□□ 0.32
SEMA6C-210ENST00000621728 RSL24D1Q9UHA3 163 aaKnown RBP17.06■□□□□ 0.32
SEMA6C-210ENST00000621728 TMEFF2Q9UIK5 374 aaPredicted RBP17.06■□□□□ 0.32
SEMA6C-210ENST00000621728 KLK13Q9UKR3 277 aa17.06■□□□□ 0.32
SEMA6C-210ENST00000621728 CCDC160A6NGH7 325 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 OR6C70A6NIJ9 312 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 SCO2O43819 266 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 ITGA10O75578 1167 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 ACAA2P42765 397 aaKnown RBP17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 HMGA2P52926 109 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 BICRALQ6AI39 1079 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 IGF2-ASQ6U949 168 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 CBLN3Q6UW01 205 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 GALNT5Q7Z7M9 940 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 GRAMD2AQ8IUY3 354 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 SLC5A8Q8N695 610 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 ZNF527Q8NB42 609 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 SLC7A13Q8TCU3 470 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 GIPC3Q8TF64 312 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 NMD3Q96D46 503 aaKnown RBP17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 FUZQ9BT04 418 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 GABARAPL1Q9H0R8 117 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 CDCP1Q9H5V8 836 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 CARD8Q9Y2G2 431 aa17.05■□□□□ 0.32
SEMA6C-210ENST00000621728 C2orf72A6NCS6 295 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 ADAM10O14672 748 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 FADS1O60427 444 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 THRBP10828 461 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 SOX3P41225 446 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 FOXC1Q12948 553 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 MICAQ29983 383 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 RFX4Q33E94 735 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 ZBED5Q49AG3 693 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 PODNL1Q6PEZ8 512 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 RANBP3LQ86VV4 465 aaPredicted RBP17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 OFCC1Q8IZS5 231 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 OR10G2Q8NGC3 310 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 GRHL3Q8TE85 626 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 HGDQ93099 445 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 DTNBP1Q96EV8 351 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 SH3YL1Q96HL8 342 aaPredicted RBP17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 RBM4BQ9BQ04 359 aaKnown RBP17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 RBM4Q9BWF3 364 aaKnown RBP17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 ARMC7Q9H6L4 198 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 PCNX3Q9H6A9 2034 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 TRABD2BA6NFA1 517 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 DXOO77932 396 aaKnown RBP17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 EVI2BP34910 448 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 ARHGDIAP52565 204 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 IL1RL1Q01638 556 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 OR1Q1Q15612 314 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 B3GNTL1Q67FW5 361 aaPredicted RBP17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 GDF7Q7Z4P5 450 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 MEX3DQ86XN8 651 aaKnown RBP17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 NKAIN4Q8IVV8 208 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 SIRT6Q8N6T7 355 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 ZNF524Q96C55 264 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 NRBF2Q96F24 287 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 SLC41A3Q96GZ6 507 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 FEVQ99581 238 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 TIMMDC1Q9NPL8 285 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 SLC7A7Q9UM01 511 aa17.04■□□□□ 0.32
SEMA6C-210ENST00000621728 ZFHX4Q86UP3 3567 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 DOCK10Q96BY6 2186 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 CCNB2O95067 398 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 GNAO1P09471 354 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 LIPCP11150 499 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 UBL4AP11441 157 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 POU2F1P14859 743 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 SKP2Q13309 424 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 RTP5Q14D33 572 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 GPR141Q7Z602 305 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 RAB43Q86YS6 212 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 ERI1Q8IV48 349 aaKnown RBP17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 CMIPQ8IY22 773 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 ATG16L2Q8NAA4 619 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 FAM71CQ8NEG0 241 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 OR10G3Q8NGC4 313 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 SLC22A8Q8TCC7 542 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 MPP4Q96JB8 637 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 MBOAT4Q96T53 435 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 TUBA1CQ9BQE3 449 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 TBL1XR1Q9BZK7 514 aa17.03■□□□□ 0.32
SEMA6C-210ENST00000621728 EML6Q6ZMW3 1958 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 A0A1W2PRQ8 180 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 GTPBP1O00178 669 aaKnown RBP17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 LYPD3O95274 346 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 FBXO45P0C2W1 286 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 WT1P19544 449 aaPredicted RBP17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 POLR2IP36954 125 aaKnown RBP17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 HLCSP50747 726 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 RPS6KA3P51812 740 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 ZNF117Q03924 483 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 DGCR6Q14129 220 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 DCST1Q5T197 706 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 FAHD1Q6P587 224 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 WDR88Q6ZMY6 472 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 TMCO5AQ8N6Q1 288 aa17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 BRIX1Q8TDN6 353 aaKnown RBP17.02■□□□□ 0.32
SEMA6C-210ENST00000621728 KIAA1143Q96AT1 154 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms