RNA–Protein interactions for RNA: ENST00000620941.1

SRSF3-208, Transcript of serine and arginine rich splicing factor 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SRSF3, Length 869 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-208ENST00000620941 CCDC189A1A4V9 331 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 VSTM5A8MXK1 200 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 ATP6V1G2-DDX39BF2Z307 99 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 KIF2AO00139 706 aaPredicted RBP11.73□□□□□ -0.53
SRSF3-208ENST00000620941 PIAS1O75925 651 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 NUDT14O95848 222 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 PGCP20142 388 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 SHC1P29353 583 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 SPRP35270 261 aaPredicted RBP11.73□□□□□ -0.53
SRSF3-208ENST00000620941 ZNF75DP51815 510 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 PDIA2Q13087 525 aaKnown RBP11.73□□□□□ -0.53
SRSF3-208ENST00000620941 SLC29A2Q14542 456 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 FAM83EQ2M2I3 478 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 GLE1Q53GS7 698 aaKnown RBP11.73□□□□□ -0.53
SRSF3-208ENST00000620941 C1QTNF12Q5T7M4 302 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 C1orf52Q8N6N3 182 aaKnown RBP11.73□□□□□ -0.53
SRSF3-208ENST00000620941 GATSQ8NAP1 163 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 B4GALNT2Q8NHY0 566 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 WDR60Q8WVS4 1066 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 SELENOMQ8WWX9 145 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 APH1AQ96BI3 265 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 RBBP8Q99708 897 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 BRF2Q9HAW0 419 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 LZTFL1Q9NQ48 299 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 MED29Q9NX70 200 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 C19orf53Q9UNZ5 99 aaPredicted RBP11.73□□□□□ -0.53
SRSF3-208ENST00000620941 MOKQ9UQ07 419 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 AMDHD2Q9Y303 409 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 PTGDR2Q9Y5Y4 395 aa11.73□□□□□ -0.53
SRSF3-208ENST00000620941 PGRMC1O00264 195 aaKnown RBP11.72□□□□□ -0.53
SRSF3-208ENST00000620941 SCDO00767 359 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 CYTIPO60759 359 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 WNT11O96014 354 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 IGHV3-9P01782 118 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 NGFRP08138 427 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 IL3P08700 152 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 LINGO3P0C6S8 592 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 CTAGE8P0CG41 777 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 PTMSP20962 102 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 GP5P40197 560 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 PPOXP50336 477 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 NCBP2P52298 156 aaKnown RBP eCLIP11.72□□□□□ -0.533e-9■■■□□ 16.8
SRSF3-208ENST00000620941 VPS26BQ4G0F5 336 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 IKBIPQ70UQ0 350 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 CTAGE4Q8IX94 777 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 ZNF786Q8N393 782 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 BPIFB2Q8N4F0 458 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 NUP43Q8NFH3 380 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 OR4C3Q8NH37 302 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 GPR151Q8TDV0 419 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 ZNF300Q96RE9 604 aaPredicted RBP11.72□□□□□ -0.53
SRSF3-208ENST00000620941 LMF2Q9BU23 707 aaKnown RBP11.72□□□□□ -0.53
SRSF3-208ENST00000620941 VPS29Q9UBQ0 182 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 SNX6Q9UNH7 406 aa11.72□□□□□ -0.53
SRSF3-208ENST00000620941 WBP11Q9Y2W2 641 aaKnown RBP11.72□□□□□ -0.53
SRSF3-208ENST00000620941 NOSIPQ9Y314 301 aaKnown RBP11.72□□□□□ -0.53
SRSF3-208ENST00000620941 HEATR1Q9H583 2144 aaKnown RBP11.71□□□□□ -0.53
SRSF3-208ENST00000620941 VWFP04275 2813 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 NBEAL2Q6ZNJ1 2754 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 OR7A17O14581 309 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 OXSR1O95747 527 aaPredicted RBP11.71□□□□□ -0.53
SRSF3-208ENST00000620941 JUNP05412 331 aaKnown RBP11.71□□□□□ -0.53
SRSF3-208ENST00000620941 MSMBP08118 114 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 HKR1P10072 659 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 SLC1A3P43003 542 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 KHKP50053 298 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 PRPS1P60891 318 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 FOXF1Q12946 379 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 DLG1Q12959 904 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 GABRA6Q16445 453 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 GRTP1Q5TC63 336 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 KLC3Q6P597 504 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 KLHL24Q6TFL4 600 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 TMEM107Q6UX40 140 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 C17orf78Q8N4C9 275 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 FBXO27Q8NI29 283 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 UBASH3BQ8TF42 649 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 LRRC37BQ96QE4 947 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 NTN4Q9HB63 628 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 UBQLN4Q9NRR5 601 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 CA10Q9NS85 328 aa11.71□□□□□ -0.53
SRSF3-208ENST00000620941 CPSF2Q9P2I0 782 aaKnown RBP11.71□□□□□ -0.53
SRSF3-208ENST00000620941 ING1Q9UK53 422 aaPredicted RBP11.71□□□□□ -0.53
SRSF3-208ENST00000620941 GPC6Q9Y625 555 aaPredicted RBP11.71□□□□□ -0.53
SRSF3-208ENST00000620941 ARFGEF3Q5TH69 2177 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 POM121CA8CG34 1229 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 UPK1AO00322 258 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 PDE5AO76074 875 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 SLU7O95391 586 aaKnown RBP11.7□□□□□ -0.54
SRSF3-208ENST00000620941 PDYNP01213 254 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 OR4A8P0C604 315 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 ARAFP10398 606 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 EDNRAP25101 427 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 TRIP10Q15642 601 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 RBMS3Q6XE24 437 aaKnown RBP11.7□□□□□ -0.54
SRSF3-208ENST00000620941 CCDC91Q7Z6B0 441 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 CTAGE3PQ8IX95 158 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 ZBED8Q8IZ13 594 aa11.7□□□□□ -0.54
SRSF3-208ENST00000620941 OR2L13Q8N349 312 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms