RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 EFNA2O43921 213 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 BCAS1O75363 584 aaPredicted RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 RCBTB2O95199 551 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 H6PDO95479 791 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 IL18BPO95998 194 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 TROVE2P10155 538 aaKnown RBP eCLIP7.44□□□□□ -1.22
NEK3-209ENST00000618856 UBL4AP11441 157 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 ETFAP13804 333 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 PRKCAP17252 672 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 GPX2P18283 190 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 ELK4P28324 431 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 GRNP28799 593 aaKnown RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 ADSLP30566 484 aaPredicted RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 GCKP35557 465 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 EIF1P41567 113 aaKnown RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 ANXA11P50995 505 aaKnown RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 ARFIP2P53365 341 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 SUCLG1P53597 346 aaKnown RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 RAC1P63000 192 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 RGNQ15493 299 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 GPR68Q15743 365 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 ADRM1Q16186 407 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 CTU2Q2VPK5 515 aaKnown RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 FBXL19-AS1Q494R0 122 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 AGKQ53H12 422 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 RUNDC3AQ59EK9 446 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 COQ5Q5HYK3 327 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 EIF3MQ7L2H7 374 aaKnown RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 GRAMD2AQ8IUY3 354 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 CMIPQ8IY22 773 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 GATSQ8NAP1 163 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 TNIP2Q8NFZ5 429 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 PHOSPHO1Q8TCT1 267 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 SLC38A5Q8WUX1 472 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 C10orf82Q8WW14 230 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 WNT2BQ93097 391 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 THOC1Q96FV9 657 aaKnown RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 CHMP6Q96FZ7 201 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 AURKBQ96GD4 344 aaPredicted RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 ZFP3Q96NJ6 502 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 RSPO3Q9BXY4 272 aaPredicted RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 ENKD1Q9H0I2 346 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 IKZF5Q9H5V7 419 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 TMEM38AQ9H6F2 299 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 SLC24A3Q9HC58 644 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 A4GALTQ9NPC4 353 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 SAR1AQ9NR31 198 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 COQ3Q9NZJ6 369 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 JKAMPQ9P055 326 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 ZNF629Q9UEG4 869 aaPredicted RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 CAMK2AQ9UQM7 478 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 SLC35A3Q9Y2D2 325 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 CARD8Q9Y2G2 431 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 RPH3AQ9Y2J0 694 aaPredicted RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 CHST2Q9Y4C5 530 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 GPC6Q9Y625 555 aaPredicted RBP7.44□□□□□ -1.22
NEK3-209ENST00000618856 MED12Q93074 2177 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 KIAA1549Q9HCM3 1950 aa7.44□□□□□ -1.22
NEK3-209ENST00000618856 A0A0G2JPF8 293 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 A1L4Q6 167 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 CLCA1A8K7I4 914 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 HSPB2A8KAH6 182 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 CYSRT1A8MQ03 144 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 HNRNPCL2B2RXH8 293 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 HNRNPCL3B7ZW38 293 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 SHISA8B8ZZ34 492 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 C19orf84I3L1E1 186 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 NR5A2O00482 541 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 FBP2O00757 339 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 DYNC1I1O14576 645 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 SLC22A2O15244 555 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 HNRNPCL1O60812 293 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 ADAM11O75078 769 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 ANP32DO95626 131 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 DBIP07108 87 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 THBS1P07996 1170 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 SNRPB2P08579 225 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 VIMP08670 466 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 NUDT7P0C024 238 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 HNRNPCL4P0DMR1 293 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 NCF2P19878 526 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 IL11P20809 199 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 PPIBP23284 216 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 HTR1EP28566 365 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 PCYT1AP49585 367 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 ZNF136P52737 540 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 CLDN20P56880 219 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 EEFSECP57772 596 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 DSTNP60981 165 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 EEF1A1P68104 462 aaKnown RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 KCNJ10P78508 379 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 CBFBQ13951 182 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 GUSBP1Q15486 140 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 TOMM34Q15785 309 aaPredicted RBP7.43□□□□□ -1.22
NEK3-209ENST00000618856 HSPB2Q16082 182 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 ZSWIM7Q19AV6 140 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 NDUFAF6Q330K2 333 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 C6orf10Q5SRN2 563 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 RNF220Q5VTB9 566 aa7.43□□□□□ -1.22
NEK3-209ENST00000618856 RAET1LQ5VY80 246 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms