RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 OR5J2Q8NH18 312 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 LILRB4Q8NHJ6 448 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SCAMP5Q8TAC9 235 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FAM46AQ96IP4 442 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 CNTNAP3BQ96NU0 1288 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 AGAP2Q99490 1192 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SH3GL2Q99962 352 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 RASL11BQ9BPW5 248 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DPH7Q9BTV6 452 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SLC22A11Q9NSA0 550 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DNAJC25-GNG10A0A024R161 153 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NPIPA7E9PJI5 369 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 LMO7DNF2Z398 122 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 MFSD11O43934 449 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NPIPA8P0DM63 369 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACTC1P68032 377 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ACTA1P68133 377 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 KLF1Q13351 362 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 ZNF343Q6P1L6 599 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 Q8NFD4 153 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NT5C3BQ969T7 300 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ZBTB45Q96K62 511 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 ALG9Q9H6U8 611 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NOVA2Q9UNW9 492 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 C13orf42A0A1B0GVH6 325 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SNAPC5O75971 98 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SLC25A16P16260 332 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 NPY1RP25929 384 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ANKRD55Q3KP44 614 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PRR22Q8IZ63 422 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR7G1Q8NGA0 311 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR6K6Q8NGW6 343 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR2L8Q8NGY9 312 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 IGDCC4Q8TDY8 1250 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TBC1D20Q96BZ9 403 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 C1GALT1C1Q96EU7 318 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TAAR6Q96RI8 345 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CENPMQ9NSP4 180 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SCAMP2O15127 329 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 TFEBP19484 476 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 MAZP56270 477 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 CCDC144NLQ6NUI1 221 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FBXL22Q6P050 247 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CPEB2Q7Z5Q1 589 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 SP7Q8TDD2 431 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 EID2BQ96D98 161 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TEPSINQ96N21 525 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SLC5A7Q9GZV3 580 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PRSS16Q9NQE7 514 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 ATXN7L1Q9ULK2 861 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 PLEKHA6Q9Y2H5 1048 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PCDHGB6Q9Y5F9 930 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 EFCAB10A6NFE3 127 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 FADS2P1A8MWK0 482 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 LATO43561 262 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GCAP28676 217 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SUB1P53999 127 aaKnown RBP eCLIP3.13□□□□□ -1.91
LPP-220ENST00000617246 PRRX1P54821 245 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 CCL7P80098 99 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 DEFB134Q4QY38 66 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TMEM185AQ8NFB2 350 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 OR5K2Q8NHB8 316 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 PURBQ96QR8 312 aaKnown RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 GAL3ST2Q9H3Q3 398 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 SIAEQ9HAT2 523 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 TOR4AQ9NXH8 423 aa3.13□□□□□ -1.91
LPP-220ENST00000617246 GPC6Q9Y625 555 aaPredicted RBP3.13□□□□□ -1.91
LPP-220ENST00000617246 PRLP01236 227 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CDH1P12830 882 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 TNFRSF17Q02223 184 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 LIAT1Q6ZQX7 453 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CIR1Q86X95 450 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 P4HTMQ9NXG6 502 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 INTS6Q9UL03 887 aaKnown RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 RNF115Q9Y4L5 304 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CLDN24A6NM45 220 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 IFNA4P05014 189 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CASP4P49662 377 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 SEC24CP53992 1094 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 OXA1LQ15070 435 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CLEC9AQ6UXN8 241 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 VASH2Q86V25 355 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CLDN22Q8N7P3 220 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 GRHL3Q8TE85 626 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 NEU4Q8WWR8 484 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 FBXO2Q9UK22 296 aaPredicted RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 E9PI62 339 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 CXCR6O00574 342 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PPM1DO15297 605 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 EMC8O43402 210 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 PSCAO43653 123 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ABHD16AO95870 558 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RLN2P04090 185 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 ARF1P84077 181 aaKnown RBP3.12□□□□□ -1.91
LPP-220ENST00000617246 CDK5R2Q13319 367 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 RIPK1Q13546 671 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 C3orf62Q6ZUJ4 267 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 OR10X1Q8NGY0 326 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 XAGE5Q8WWM1 108 aa3.12□□□□□ -1.91
LPP-220ENST00000617246 GIMAP5Q96F15 307 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms