RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 RHBDD2Q6NTF9 364 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 GTF2IRD2Q86UP8 949 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 PPP1R3BQ86XI6 285 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 GHDCQ8N2G8 530 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 LRRC17Q8N6Y2 441 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 FAM181AQ8N9Y4 354 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 PHOSPHO1Q8TCT1 267 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 OR1F2PQ96R84 312 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 TRIM45Q9H8W5 580 aaPredicted RBP7.17□□□□□ -1.26
NEK3-207ENST00000617054 MEPEQ9NQ76 525 aaPredicted RBP7.17□□□□□ -1.26
NEK3-207ENST00000617054 A0A1B0GWA3 101 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 H3BMQ9 156 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 ICOSLGO75144 302 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 IGKV3-11P04433 115 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 IFI30P13284 250 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 HPGDP15428 266 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 CSTF2P33240 577 aaKnown RBP eCLIP7.17□□□□□ -1.26
NEK3-207ENST00000617054 NUP107P57740 925 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 PAQR6Q6TCH4 344 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 QSOX2Q6ZRP7 698 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 ZBTB44Q8NCP5 570 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 OR13F1Q8NGS4 319 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 ACOT11Q8WXI4 607 aaPredicted RBP7.17□□□□□ -1.26
NEK3-207ENST00000617054 MVB12AQ96EY5 273 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 SAMD8Q96LT4 415 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 COG8Q96MW5 612 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 FUNDC2Q9BWH2 189 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 TSSK6Q9BXA6 273 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 CLEC2DQ9UHP7 191 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 PSORS1C1Q9UIG5 152 aa7.17□□□□□ -1.26
NEK3-207ENST00000617054 FRYQ5TBA9 3013 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ZC3H12DA2A288 527 aaKnown RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 TRAPPC13A5PLN9 417 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 CLCA1A8K7I4 914 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 HEXBP07686 556 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 SAGP10523 405 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 PNLIPP16233 465 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 IFNA8P32881 189 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 RORAP35398 523 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ACY1Q03154 408 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 EIPR1Q53HC9 387 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ALG10BQ5I7T1 473 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 NIPAL1Q6NVV3 410 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 KIRREL2Q6UWL6 708 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 LHFPL2Q6ZUX7 228 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 MBOAT2Q6ZWT7 520 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 MARCH3Q86UD3 253 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 IGFN1Q86VF2 1251 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 STX19Q8N4C7 294 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 TMCO5AQ8N6Q1 288 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 PIGXQ8TBF5 258 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 TMEM239Q8WW34 195 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 HOXB13Q92826 284 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 RPL3LQ92901 407 aaKnown RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 ADIPOR1Q96A54 375 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 NACC2Q96BF6 587 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 LRR1Q96L50 414 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 PSD2Q9BQI7 771 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 MED20Q9H944 212 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ACOT13Q9NPJ3 140 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 METRNQ9UJH8 293 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 HSPE1-MOB4S4R3N1 261 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ARRDC5A6NEK1 342 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ZNF99A8MXY4 864 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 D6RAR5 112 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 WWP2O00308 870 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 POLR1CO15160 346 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 ALOX12BO75342 701 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 SEC14L2O76054 403 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 SLITRK5O94991 958 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 LYPD3O95274 346 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 PTHP01270 115 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ZNF182P17025 639 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 ATP12AP54707 1039 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 FXYD6P3P58550 94 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 DCDP81605 110 aaKnown RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 TOP3AQ13472 1001 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 ELAVL1Q15717 326 aaKnown RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 DECR1Q16698 335 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 SOWAHCQ53LP3 525 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 PEAR1Q5VY43 1037 aaPredicted RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 B3GNT6Q6ZMB0 384 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 KMT5CQ86Y97 462 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 SLITRK4Q8IW52 837 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 BBS1Q8NFJ9 593 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 OR13C2Q8NGS9 318 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 OR4Q3Q8NH05 313 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ADAMTS18Q8TE60 1221 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 RORBQ92753 470 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 NAT6Q93015 286 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 ZNF566Q969W8 418 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 OR5M11Q96RB7 305 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 NDUFA13Q9P0J0 144 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 FBXO4Q9UKT5 387 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 PNMA8CA0A1B0GUJ8 204 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 SERINC4A6NH21 518 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 MEN1O00255 615 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 TRMUO75648 421 aaKnown RBP7.16□□□□□ -1.26
NEK3-207ENST00000617054 OR5F1O95221 314 aa7.16□□□□□ -1.26
NEK3-207ENST00000617054 UTS2O95399 124 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms