RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 ANGPTL6Q8NI99 470 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 CAPSLQ8WWF8 208 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 SCARF2Q96GP6 870 aaPredicted RBP12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 PRRG3Q9BZD7 231 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 OR51V1Q9H2C8 321 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 NLGN3Q9NZ94 848 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 USP36Q9P275 1121 aaKnown RBP12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 KCNE5Q9UJ90 142 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 GSTK1Q9Y2Q3 226 aa12.9□□□□□ -0.34
CACNA1C-231ENST00000616390 TCRBV21S2A2A0A5A6 115 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 MAKP20794 623 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 HNRNPA2B1P22626 353 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 HTR2AP28223 471 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SLC9A3P48764 834 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 TPMTP51580 245 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 BNC1Q01954 994 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 OR1Q1Q15612 314 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 CCDC58Q4VC31 144 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 HEPHL1Q6MZM0 1159 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ABHD13Q7L211 337 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 CXXC5Q7LFL8 322 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ABI3BPQ7Z7G0 1075 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 MARCH9Q86YJ5 346 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 OR2L13Q8N349 312 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 RFKQ969G6 155 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 TXNDC15Q96J42 360 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ZFYVE21Q9BQ24 234 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 CCDC32Q9BV29 185 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 HCAR1Q9BXC0 346 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 OR52D1Q9H346 318 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 UBQLN3Q9H347 655 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 C8orf33Q9H7E9 229 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SIAEQ9HAT2 523 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 FGF20Q9NP95 211 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 PPP1R14DQ9NXH3 145 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 TNFRSF10DQ9UBN6 386 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 CBLCQ9ULV8 474 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 EXOSC1Q9Y3B2 195 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SF3B6Q9Y3B4 125 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SLC22A7Q9Y694 548 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SEC16AO15027 2179 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 TRAV27A0A087WT01 109 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 URADA6NGE7 173 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 KDM4EB2RXH2 506 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 FPR3P25089 353 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 STAT5AP42229 794 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ZNF136P52737 540 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 COPZ1P61923 177 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 KRR1Q13601 381 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 KIR2DS3Q14952 304 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 NNATQ16517 81 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ARHGAP11BQ3KRB8 267 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SLC25A30Q5SVS4 291 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 PRAMEF8Q5VWM4 474 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 PRAMEF7Q5VXH5 474 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ZAR1Q86SH2 424 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 RANBP3LQ86VV4 465 aaPredicted RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 CYB561A3Q8NBI2 242 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 CAMKVQ8NCB2 501 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 OR13H1Q8NG92 308 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 PTCHD1Q96NR3 888 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 CCDC3Q9BQI4 270 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SRRQ9GZT4 340 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 PIAS3Q9Y6X2 628 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 TMEM129A0AVI4 362 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 B8ZZF3 427 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 HPGDSO60760 199 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 IL1AP01583 271 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ZGLP1P0C6A0 271 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 PAICSP22234 425 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 APEX1P27695 318 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ILF3Q12906 894 aaKnown RBP eCLIP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 SSPNQ14714 243 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 DDI2Q5TDH0 399 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 AADACL4Q5VUY2 407 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 GJD3Q8N144 294 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 GHDCQ8N2G8 530 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ATP6V1C2Q8NEY4 427 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 FANK1Q8TC84 345 aa12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 DDX28Q9NUL7 540 aaKnown RBP12.89□□□□□ -0.35
CACNA1C-231ENST00000616390 ALPK2Q86TB3 2170 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 STX11O75558 287 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 GYPBP06028 91 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 CLUP10909 449 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 BMP7P18075 431 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 RFX2P48378 723 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 GPR85P60893 370 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 SMAD4Q13485 552 aaKnown RBP12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 ERV3-1Q14264 604 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 TMEM95Q3KNT9 176 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 DGAT2L6Q6ZPD8 337 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 KLHL36Q8N4N3 616 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 OR10H4Q8NGA5 316 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 NT5CQ8TCD5 201 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 TMCO6Q96DC7 493 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 TM4SF19Q96DZ7 209 aa12.88□□□□□ -0.35
CACNA1C-231ENST00000616390 IFT27Q9BW83 186 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms