RNA–Protein interactions for RNA: ENST00000615653.1

HMGB1P24-202, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 685 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-202ENST00000615653 NTN4Q9HB63 628 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 LPAR2Q9HBW0 351 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 LYRM4Q9HD34 91 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 DNAJC4Q9NNZ3 241 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 MYOZ2Q9NPC6 264 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 C8orf4Q9NR00 106 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 GKN1Q9NS71 199 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SMOXQ9NWM0 555 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SPHK1Q9NYA1 384 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 EURLQ9NYK6 297 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 USE1Q9NZ43 259 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SLC12A6Q9UHW9 1150 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 LCMT1Q9UIC8 334 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ZNF639Q9UID6 485 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 VANGL2Q9ULK5 521 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 RBMX2Q9Y388 322 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 SAMHD1Q9Y3Z3 626 aaKnown RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 ATG4BQ9Y4P1 393 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 KLF2Q9Y5W3 355 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 V9GYQ6 96 aa2.29□□□□□ -2.04
HMGB1P24-202ENST00000615653 MAP3K15Q6ZN16 1313 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TRAV18A0A075B6X5 111 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR2M5A3KFT3 312 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CCDC182A6NF36 153 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 FRG2CA6NGY1 282 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CENPXA8MT69 81 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 HEPACAM2A8MVW5 462 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 H3BTX0 84 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TMEM189-UBE2V1I3L0A0 370 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 J3QR06 171 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SGK494L7N484 410 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 HAS3O00219 553 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SDHDO14521 159 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TOR1AO14656 332 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 AIM2O14862 343 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 LIN7AO14910 233 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SCAMP2O15127 329 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 NBR2O15453 112 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CFLARO15519 480 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PLPP2O43688 288 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 HSBP1O75506 76 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OR2F2O95006 317 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CLDN9O95484 217 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 EML2O95834 649 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 FADS2O95864 444 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ASS1P00966 412 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CST1P01037 141 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MT-ND2P03891 347 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 RPN2P04844 631 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 GSTA1P08263 222 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ANXA5P08758 320 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 GSTT2P0CG29 244 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 GSTT2BP0CG30 244 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 GOLGA8HP0CJ92 632 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MLNP12872 115 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CEACAM1P13688 526 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PCMT1P22061 227 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MMP11P24347 488 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 STOMP27105 288 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PSMB6P28072 239 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 LAP3P28838 519 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CDH5P33151 784 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PTGER4P35408 488 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 FEN1P39748 380 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MATKP42679 507 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CRYBB2P43320 205 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ACADSBP45954 432 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ARRB1P49407 418 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CASP4P49662 377 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 RPS6P62753 249 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CDK16Q00536 496 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 IL9RQ01113 521 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CDR2Q01850 454 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 OGDHQ02218 1023 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 RAD51Q06609 339 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 STX3Q13277 289 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 UBE2V1Q13404 147 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PEX6Q13608 980 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CRMP1Q14194 572 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TSC22D1Q15714 1073 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PSG3Q16557 428 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 C18orf21Q32NC0 220 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 XKR6Q5GH73 641 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 DDI2Q5TDH0 399 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 THOC7Q6I9Y2 204 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 RTL6Q6ICC9 239 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SLC8B1Q6J4K2 584 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TTC33Q6PID6 262 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TMEM220Q6QAJ8 160 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 PID1Q7Z2X4 250 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 ACOT1Q86TX2 421 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SERPINA9Q86WD7 417 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TRIM69Q86WT6 500 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 MMAAQ8IVH4 418 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 SELENOHQ8IZQ5 122 aaKnown RBP2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TMEM123Q8N131 208 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 GPC2Q8N158 579 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 CLDN19Q8N6F1 224 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TEX26Q8N6G2 289 aa2.28□□□□□ -2.04
HMGB1P24-202ENST00000615653 TMEM99Q8N816 258 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms