RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 IDSB3KWA1 339 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 PRSS56P0CW18 603 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 PNLIPP16233 465 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 PRKACBP22694 351 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 GABARAPL2P60520 117 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 LCN8Q6JVE9 175 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 KCTD20Q7Z5Y7 419 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 KIF18BQ86Y91 864 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 CANT1Q8WVQ1 401 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZNF566Q969W8 418 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 ACPTQ9BZG2 426 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 FAIMQ9NVQ4 179 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 MYOTQ9UBF9 498 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 SH3BGRL2Q9UJC5 107 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 ACSL6Q9UKU0 697 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 RASAL1O95294 804 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 MSX2P35548 267 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 FASLGP48023 281 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 LIM2P55344 173 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 PPIAP62937 165 aaKnown RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 MICAQ29983 383 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZNF585AQ6P3V2 769 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 SHISA6Q6ZSJ9 500 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 SLC16A14Q7RTX9 510 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 TMEM130Q8N3G9 435 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 TCEANCQ8N8B7 351 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZNF610Q8N9Z0 462 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 CIDECQ96AQ7 238 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 OR10A4Q9H209 315 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 NIPAL2Q9H841 368 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 UCK1Q9HA47 277 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 SDR39U1Q9NRG7 319 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 KCMF1Q9P0J7 381 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 USP22Q9UPT9 525 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 NARSO43776 548 aaKnown RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 RAB3AP20336 220 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 PSMB5P28074 263 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 BCL6P41182 706 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 PRKCDQ05655 676 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 DBPQ10586 325 aaPredicted RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 SSPNQ14714 243 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 CDK10Q15131 360 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 RAB11BQ15907 218 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 BOLLQ8N9W6 283 aaKnown RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 SLC30A3Q99726 388 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 P2RY12Q9H244 342 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 SRA1Q9HD15 236 aaKnown RBP9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 A4GALTQ9NPC4 353 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 RIMS3Q9UJD0 308 aa9.1□□□□□ -0.95
TNFRSF9-204ENST00000615230 CLPXO76031 633 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 HMGN2P05204 90 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 NKPD1Q17RQ9 610 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 WDR88Q6ZMY6 472 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 CCDC71LQ8N9Z2 235 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 OR8J2Q8NGG1 315 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ATOH8Q96SQ7 321 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 LRRC61Q9BV99 259 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 PCDHAC1Q9H158 963 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ABCB10Q9NRK6 738 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZFP57Q9NU63 452 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 AASSQ9UDR5 926 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 DPPA5A6NC42 116 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 F7P08709 466 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 P2RX1P51575 399 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 TMBIM6P55061 237 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZBED5Q49AG3 693 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ABHD17CQ6PCB6 329 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 OR51A7Q8NH64 312 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 OR5AK2Q8NH90 309 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 APH1AQ96BI3 265 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 CLEC4AQ9UMR7 237 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 OAZ3Q9UMX2 235 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ABCG2Q9UNQ0 655 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 EEF1E1-BLOC1S5C9J1V9 151 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 SYT5O00445 386 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 EEF1E1O43324 174 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ARR3P36575 388 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 CCR2P41597 374 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 MAT1AQ00266 395 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 RABL3Q5HYI8 236 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 SPATC1Q76KD6 591 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZNF321PQ8N8H1 164 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 INTS14Q96SY0 518 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 DLEC1Q9Y238 1755 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 C2orf72A6NCS6 295 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 C21orf140B9A014 251 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 K7ESM1 405 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ETFAP13804 333 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ELAVL4P26378 380 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 PRKAR1BP31321 381 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 NAA10P41227 235 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 SLC1A3P43003 542 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 MAP2K6P52564 334 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 PPP2CBP62714 309 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 PPP2CAP67775 309 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 KCNJ10P78508 379 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ACVR1Q04771 509 aa9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 ZNF169Q14929 603 aaPredicted RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 EXOSC7Q15024 291 aaKnown RBP9.09□□□□□ -0.95
TNFRSF9-204ENST00000615230 NRMQ8IXM6 262 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms