RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GPX8Q8TED1 209 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 HMCESQ96FZ2 354 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 LYSMD1Q96S90 227 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 MMP26Q9NRE1 261 aa8.29□□□□□ -1.08
TTC28-208ENST00000612946 TCRBV7S3A2A0A539 114 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 MMP2P08253 660 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 CST2P09228 141 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 AHCYP23526 432 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 DTYMKP23919 212 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 GP2P55259 537 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 MRPS6P82932 125 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 HFE2Q6ZVN8 426 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SLC2A13Q96QE2 648 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 BCO2Q9BYV7 579 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 TMEM235A6NFC5 223 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 M0R3H8 397 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 GBAP04062 536 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 ATP1B1P05026 303 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 MPC1LP0DKB6 136 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 CTSEP14091 401 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 BCKDHBP21953 392 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 ECM1Q16610 540 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 BRICD5Q6PL45 260 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SLC38A6Q8IZM9 456 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 DCBLD1Q8N8Z6 715 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 ARRDC4Q8NCT1 418 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 OR52N1Q8NH53 320 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 TRPM6Q9BX84 2022 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 PNMTP11086 282 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 THBS2P35442 1172 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 B3GNTL1Q67FW5 361 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 LAX1Q8IWV1 398 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 LCN9Q8WX39 176 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SLAMF9Q96A28 289 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 MSI2Q96DH6 328 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 MT-CYBP00156 380 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 DIO3P55073 304 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 ITPK1Q13572 414 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 LYPD4Q6UWN0 246 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 EDAQ92838 391 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 CMSS1Q9BQ75 279 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 BABAM2Q9NXR7 383 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SIX3O95343 332 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 SERPINA7P05543 415 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SERPINE2P07093 398 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 CD63P08962 238 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SDHBP21912 280 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 EEF1A1P68104 462 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 EEF1A2Q05639 463 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 CRHR2Q13324 411 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 MPPED2Q15777 294 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 EEF1A1P5Q5VTE0 462 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 C17orf107Q6ZR85 190 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 CELF2-AS1Q8N7Q2 184 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 DNAJC5GQ8N7S2 189 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 FBXO27Q8NI29 283 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 TTPALQ9BTX7 342 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SLC2A9Q9NRM0 540 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 ACSS1Q9NUB1 689 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 ABI3Q9P2A4 366 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 ARRDC5A6NEK1 342 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 POM121CA8CG34 1229 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 H2BFMP0C1H6 154 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SSTR4P31391 388 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 TMIGD1Q6UXZ0 262 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 OR4K5Q8NGD3 323 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SYT17Q9BSW7 474 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 GABRPO00591 440 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 GDNFP39905 211 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 UNC50Q53HI1 259 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 GHRLQ9UBU3 117 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 NDRG2Q9UN36 371 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 SPTA1P02549 2419 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 SMIM35A0A1B0GVV1 85 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 ACPPP15309 386 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 CRYBB1P53674 252 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 TLE1Q04724 770 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 FOXO1Q12778 655 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 CNTN4Q8IWV2 1026 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 DAZAP1Q96EP5 407 aaKnown RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 SLC25A44Q96H78 314 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 EDEM2Q9BV94 578 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 BACE2Q9Y5Z0 518 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 COL5A2P05997 1499 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 ARHGEF17Q96PE2 2063 aaPredicted RBP8.28□□□□□ -1.08
TTC28-208ENST00000612946 NEMP2A6NFY4 417 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 KLK1P06870 262 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 OVCA2Q8WZ82 227 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 STYXL1Q9Y6J8 313 aa8.28□□□□□ -1.08
TTC28-208ENST00000612946 LNP1A1A4G5 178 aa8.27□□□□□ -1.08
TTC28-208ENST00000612946 A6NIZ1 184 aa8.27□□□□□ -1.08
TTC28-208ENST00000612946 ZNF280AP59817 542 aaPredicted RBP8.27□□□□□ -1.08
TTC28-208ENST00000612946 RAP1BP61224 184 aa8.27□□□□□ -1.08
TTC28-208ENST00000612946 TRIM61Q5EBN2 209 aa8.27□□□□□ -1.08
TTC28-208ENST00000612946 NLRC3Q7RTR2 1065 aa8.27□□□□□ -1.08
TTC28-208ENST00000612946 NETO1Q8TDF5 533 aa8.27□□□□□ -1.08
TTC28-208ENST00000612946 CHRDL1Q9BU40 450 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms