RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 PRIM2P49643 509 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TMED10P49755 219 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CLK3P49761 638 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 ST13P50502 369 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 MLLT10P55197 1068 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 TPD52P55327 224 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CXCR4P61073 352 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 HSPB3Q12988 150 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CDK5R2Q13319 367 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 LAPTM4AQ15012 233 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 INPP5JQ15735 1006 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 IFI44LQ53G44 452 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 RTL4Q6ZR62 310 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF227Q86WZ6 799 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CLVS1Q8IUQ0 354 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SPARTQ8N0X7 666 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 FAM98AQ8NCA5 519 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SIMC1Q8NDZ2 872 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SETD9Q8NE22 299 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 OR4C15Q8NGM1 316 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 OR13F1Q8NGS4 319 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NFKBIDQ8NI38 313 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 CPT1CQ8TCG5 803 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 LZICQ8WZA0 190 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 SPACA9Q96E40 222 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 VSTM2LQ96N03 204 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 PITX2Q99697 317 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 ITPAQ9BY32 194 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 FOLH1BQ9HBA9 442 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 C3orf14Q9HBI5 128 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NEUROD4Q9HD90 331 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 A4GALTQ9NPC4 353 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NTMQ9P121 344 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NDRG4Q9ULP0 352 aaKnown RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 DTX4Q9Y2E6 619 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 KLF13Q9Y2Y9 288 aaPredicted RBP8.11□□□□□ -1.11
SMAD4-217ENST00000611848 NPFFR2Q9Y5X5 522 aa8.11□□□□□ -1.11
SMAD4-217ENST00000611848 GTF3C1Q12789 2109 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 PRAMEF25A6NGN4 478 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 FRG2CA6NGY1 282 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 KLRC4-KLRK1H3BQV0 150 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 SLC1A7O00341 560 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 TO15178 435 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ADAMDEC1O15204 470 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 EMC8O43402 210 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 NME2P1O60361 137 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 HTR1AP08908 422 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 NAGAP17050 411 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ITGA2P17301 1181 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 NME2P22392 152 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 CASP9P55211 416 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 DSTNP60981 165 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 PRR5P85299 388 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 TLE1Q04724 770 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 NTRK2Q16620 822 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF791Q3KP31 576 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 GTF2IRD2BQ6EKJ0 949 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 LYPD8Q6UX82 237 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ANGPTL8Q6UXH0 198 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 GALNTL5Q7Z4T8 443 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 GALNT5Q7Z7M9 940 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 GTF2IRD2Q86UP8 949 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 TSPYL5Q86VY4 417 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ARMC8Q8IUR7 673 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 CISD2Q8N5K1 135 aaKnown RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 PSD4Q8NDX1 1056 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 OR5AK3PQ8NH89 298 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 MOAP1Q96BY2 351 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 SNRNP40Q96DI7 357 aaKnown RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF300Q96RE9 604 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 GABARAPL3Q9BY60 117 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 NXF5Q9H1B4 397 aaKnown RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ANKRA2Q9H9E1 313 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 KLHL1Q9NR64 748 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 SIRT3Q9NTG7 399 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 ANGPT4Q9Y264 503 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 GPR55Q9Y2T6 319 aaPredicted RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 PCDHGB1Q9Y5G3 927 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 LYVE1Q9Y5Y7 322 aa8.1□□□□□ -1.11
SMAD4-217ENST00000611848 SPENQ96T58 3664 aaKnown RBP8.1□□□□□ -1.11
SMAD4-217ENST00000611848 C3orf80F5H4A9 247 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 TNFRSF11BO00300 401 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 TP53I11O14683 189 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 CRYABP02511 175 aaKnown RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 CT45A8P0DMV1 189 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 CT45A9P0DMV2 189 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 EEF1B2P24534 225 aaKnown RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 ABCD3P28288 659 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 RRM2P31350 389 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SOAT1P35610 550 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 LIMS1P48059 325 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 HMGA2P52926 109 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 TMBIM6P55061 237 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 RPP38P78345 283 aaKnown RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 ZNF155Q12901 538 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 NPRL3Q12980 569 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 ZNHIT3Q15649 155 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-217ENST00000611848 NEDD8Q15843 81 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 CT45A2Q5DJT8 189 aa8.09□□□□□ -1.11
SMAD4-217ENST00000611848 SLC22A10Q63ZE4 541 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms