RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 BHLHE40O14503 412 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 DUX1O43812 170 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 IL1AP01583 271 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CT45A8P0DMV1 189 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CT45A9P0DMV2 189 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 GAAP10253 952 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 MAKP20794 623 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ACAA2P42765 397 aaKnown RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CAPZA2P47755 286 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ARL4DP49703 201 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 RORCP51449 518 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 MAT1AQ00266 395 aaKnown RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CT45A2Q5DJT8 189 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 LINC00114Q6XXX2 140 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 WDR88Q6ZMY6 472 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 RTL4Q6ZR62 310 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CXXC5Q7LFL8 322 aaKnown RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ZAR1Q86SH2 424 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SIX5Q8N196 739 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ZNF615Q8N8J6 731 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 OR52N1Q8NH53 320 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 C16orf52Q8NHV5 167 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 DNAJA4Q8WW22 397 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ABTB1Q969K4 478 aaPredicted RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CNPPD1Q9BV87 410 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 EXOSC4Q9NPD3 245 aaKnown RBP11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CMC2Q9NRP2 79 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 INPP5EQ9NRR6 644 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 CUTCQ9NTM9 273 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 RPS6KB2Q9UBS0 482 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SIGLEC7Q9Y286 467 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 SLC35A3Q9Y2D2 325 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 OR10H1Q9Y4A9 318 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 RNF215Q9Y6U7 377 aa11.04□□□□□ -0.64
USP6NL-206ENST00000609853 TRIOO75962 3097 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 ABCA7Q8IZY2 2146 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SLC30A4O14863 429 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 POLR1CO15160 346 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 BCAT2O15382 392 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 AKAP8O43823 692 aaKnown RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 PTP4A3O75365 173 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 OR2B3O76000 313 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SNX4O95219 450 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 NTN1O95631 604 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 CH25HO95992 272 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 IGKV1D-16P01601 117 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 IFNA16P05015 189 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 ZGLP1P0C6A0 271 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 LIMS3P0CW19 117 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 LIMS4P0CW20 117 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SAGP10523 405 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 GLB1P16278 677 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 TBXA2RP21731 343 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 PAICSP22234 425 aaKnown RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 LCN1P31025 176 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 GABRA5P31644 462 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 ADH7P40394 386 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SLC1A3P43003 542 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 GPR143P51810 404 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 RPS3AP61247 264 aaKnown RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 BTG2P78543 158 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 BDH1Q02338 343 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 PLAURQ03405 335 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 ATP1A4Q13733 1029 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SOWAHCQ53LP3 525 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SPANXN2Q5MJ10 180 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 LIPKQ5VXJ0 399 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 NPSR1Q6W5P4 371 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 HSDL2Q6YN16 418 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 MEPCEQ7L2J0 689 aaKnown RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 KLHL36Q8N4N3 616 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 ZNF614Q8N883 585 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 RNF217Q8TC41 542 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SLC46A1Q96NT5 459 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 MED18Q9BUE0 208 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SPRTNQ9H040 489 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 CAPN10Q9HC96 672 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 C20orf141Q9NUB4 165 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 TNFRSF10DQ9UBN6 386 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 DAPK2Q9UIK4 370 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 MRTO4Q9UKD2 239 aaKnown RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 ERVK-19Q9WJR5 959 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 GSTK1Q9Y2Q3 226 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 SPIN1Q9Y657 262 aaPredicted RBP11.03□□□□□ -0.64
USP6NL-206ENST00000609853 PCDH15Q96QU1 1955 aa11.03□□□□□ -0.64
USP6NL-206ENST00000609853 EYSQ5T1H1 3165 aa11.02□□□□□ -0.64
USP6NL-206ENST00000609853 IGHV1OR21-1A0A087WYE8 117 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 SERINC4A6NH21 518 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 SLC22A31A6NKX4 558 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 LOC110117498-PIK3R3F6TDL0 507 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 H3BMH7 237 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 PPM1BO75688 479 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 CDC123O75794 336 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 UPK1BO75841 260 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 IGF2P01344 180 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 MAOAP21397 527 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 GALP22466 123 aa11.02□□□□□ -0.65
USP6NL-206ENST00000609853 FGF9P31371 208 aaPredicted RBP11.02□□□□□ -0.65
USP6NL-206ENST00000609853 ATP6V1E1P36543 226 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms