RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 TPRA1Q86W33 373 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 MEX3DQ86XN8 651 aaKnown RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 SPRYD4Q8WW59 207 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ISOC2Q96AB3 205 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CNTNAP3BQ96NU0 1288 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 GPN1Q9HCN4 374 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RNF186Q9NXI6 227 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 WWOXQ9NZC7 414 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 SPG21Q9NZD8 308 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CARHSP1Q9Y2V2 147 aaKnown RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 FNDC1Q4ZHG4 1894 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 OR14I1A6ND48 311 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 A6NLC8 198 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 AP4M1O00189 453 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 PGRMC2O15173 223 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RBBP9O75884 186 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 UBL3O95164 117 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 C6orf47O95873 294 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 MGMTP16455 207 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 GNG10P50151 68 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CCR8P51685 355 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 GAS1P54826 345 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 F2RL1P55085 397 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 DLX5P56178 289 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 GAB1Q13480 694 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 TRAM1Q15629 374 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ALKAL1Q6UXT8 129 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF546Q86UE3 836 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 SYT12Q8IV01 421 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 CD99L2Q8TCZ2 262 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RGMAQ96B86 450 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 RAB3CQ96E17 227 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 SMOC1Q9H4F8 434 aa11.73□□□□□ -0.53
CTCFL-218ENST00000608440 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
CTCFL-218ENST00000608440 hCG_1809904A0A1W2PP81 198 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 A0A1W2PR64 198 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 A0A1W2PRV1 198 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 TRBC2A0A5B9 178 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ANKRD61A6NGH8 418 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 GPR39O43194 453 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 FADS1O60427 444 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 DUSP11O75319 330 aaKnown RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SH3BGRLO75368 114 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 PMP2P02689 132 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 MMP2P08253 660 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 PKMP14618 531 aaKnown RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 AGAP20933 346 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 UQCRC2P22695 453 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 AVPR2P30518 371 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 PCGF2P35227 344 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 STAT5AP42229 794 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 MTNR1AP48039 350 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 MTNR1BP49286 362 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 EOGTQ5NDL2 527 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ADAM5Q6NVV9 412 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 POMZP3Q6PJE2 187 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF852Q6ZMS4 543 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 GPRIN1Q7Z2K8 1008 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 OR6V1Q8N148 313 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF784Q8NCA9 323 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 LRIG1Q96JA1 1093 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ZFP42Q96MM3 310 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 MRPL37Q9BZE1 423 aaKnown RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 LAT2Q9GZY6 243 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 LMAN2LQ9H0V9 348 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 TMEM72A0PK05 275 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 H7C0S8 307 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 FFAR1O14842 300 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SCN2BO60939 215 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 EFCAB14O75071 495 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 PRPS2P11908 318 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ARF4P18085 180 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 DYRK1AQ13627 763 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SURF2Q15527 256 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 OR8G1Q15617 311 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 FIGNL1Q6PIW4 674 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 MBOAT1Q6ZNC8 495 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SYT9Q86SS6 491 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 TMPRSS11BQ86T26 416 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 TMEM200AQ86VY9 491 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 FAM26EQ8N5C1 309 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 OR9A2Q8NGT5 310 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SORCS1Q8WY21 1168 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 C3orf49Q96BT1 292 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 TMEM138Q9NPI0 162 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 SMCO4Q9NRQ5 59 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ASIC5Q9NY37 505 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ENPP4Q9Y6X5 453 aa11.72□□□□□ -0.53
CTCFL-218ENST00000608440 ZNF197O14709 1029 aa11.71□□□□□ -0.53
CTCFL-218ENST00000608440 ADAP00813 363 aa11.71□□□□□ -0.53
CTCFL-218ENST00000608440 ACP2P11117 423 aa11.71□□□□□ -0.53
CTCFL-218ENST00000608440 PSMA3P25788 255 aa11.71□□□□□ -0.53
CTCFL-218ENST00000608440 CCND3P30281 292 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms