RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 ZNF136P52737 540 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 GPAT3Q53EU6 434 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 TYW3Q6IPR3 259 aaKnown RBP17.32■□□□□ 0.36
SRSF4-206ENST00000605204 BLOC1S3Q6QNY0 202 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 DNAJC14Q6Y2X3 702 aaPredicted RBP17.32■□□□□ 0.36
SRSF4-206ENST00000605204 ESPNLQ6ZVH7 1005 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 P4HA3Q7Z4N8 544 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 CMIPQ8IY22 773 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 C9orf106Q8NAJ2 232 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 MRGPRX4Q96LA9 322 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 LAT2Q9GZY6 243 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 TPT1P8Q9HAU6 139 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 NPDC1Q9NQX5 325 aaPredicted RBP17.32■□□□□ 0.36
SRSF4-206ENST00000605204 P2RX2Q9UBL9 471 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 CARD8Q9Y2G2 431 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 CCDC168Q8NDH2 2452 aa17.32■□□□□ 0.36
SRSF4-206ENST00000605204 TMEM247A6NEH6 219 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 ETV2O00321 342 aaPredicted RBP17.31■□□□□ 0.36
SRSF4-206ENST00000605204 ATP8B1O43520 1251 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 GSNP06396 782 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 SNRPB2P08579 225 aaKnown RBP17.31■□□□□ 0.36
SRSF4-206ENST00000605204 PSMA4P25789 261 aaKnown RBP17.31■□□□□ 0.36
SRSF4-206ENST00000605204 SSTR2P30874 369 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 FUT5Q11128 374 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 SKP2Q13309 424 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 PDSS1Q5T2R2 415 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 METTL21CQ5VZV1 264 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 CBLN3Q6UW01 205 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 MEX3BQ6ZN04 569 aaKnown RBP17.31■□□□□ 0.36
SRSF4-206ENST00000605204 FRRS1Q6ZNA5 592 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 LRRC74BQ6ZQY2 392 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 LIX1LQ8IVB5 337 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 TMCO5AQ8N6Q1 288 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 TMEM234Q8WY98 164 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 GTF2H4Q92759 462 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 VPS33AQ96AX1 596 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 SPDL1Q96EA4 605 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 C14orf79Q96F83 325 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 RNF145Q96MT1 663 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 PIGMQ9H3S5 423 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 EXOSC3Q9NQT5 275 aaKnown RBP17.31■□□□□ 0.36
SRSF4-206ENST00000605204 PRDM4Q9UKN5 801 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 L3MBTL1Q9Y468 752 aa17.31■□□□□ 0.36
SRSF4-206ENST00000605204 A0A096LPI6 279 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 SYT5O00445 386 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 ADAMDEC1O15204 470 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 SEC14L5O43304 696 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 DNAJA2O60884 412 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 H6PDO95479 791 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 TROVE2P10155 538 aaKnown RBP eCLIP17.3■□□□□ 0.36
SRSF4-206ENST00000605204 NR2F1P10589 423 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 PPIBP23284 216 aaKnown RBP17.3■□□□□ 0.36
SRSF4-206ENST00000605204 CASP9P55211 416 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 FADDQ13158 208 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 SLC25A53Q5H9E4 307 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 GGNQ86UU5 652 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 DMRTC2Q8IXT2 367 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-206ENST00000605204 RELL2Q8NC24 303 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-206ENST00000605204 FAM71CQ8NEG0 241 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 OR5M1Q8NGP8 315 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 ST8SIA1Q92185 356 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 SMPDL3BQ92485 455 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 RNASE6Q93091 150 aaKnown RBP17.3■□□□□ 0.36
SRSF4-206ENST00000605204 MTHFD2LQ9H903 347 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-206ENST00000605204 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-206ENST00000605204 CCDC167Q9P0B6 97 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 HIVEP1P15822 2718 aa17.3■□□□□ 0.36
SRSF4-206ENST00000605204 KDM4EB2RXH2 506 aaPredicted RBP17.29■□□□□ 0.36
SRSF4-206ENST00000605204 PGCP20142 388 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 SLC6A8P48029 635 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 CRISP3P54108 245 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 CLDN20P56880 219 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 FOXF1Q12946 379 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 SELENBP1Q13228 472 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 SGCBQ16585 318 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 ZSWIM7Q19AV6 140 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 POMZP3Q6PJE2 187 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 GPR119Q8TDV5 335 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 TSPEARQ8WU66 669 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 PINK1Q9BXM7 581 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 TRIM8Q9BZR9 551 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 RNF122Q9H9V4 155 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 CACYBPQ9HB71 228 aaKnown RBP17.29■□□□□ 0.36
SRSF4-206ENST00000605204 NPHS2Q9NP85 383 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 TIGARQ9NQ88 270 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 KCNN3Q9UGI6 736 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 KCNE5Q9UJ90 142 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 MCTS1Q9ULC4 181 aaKnown RBP17.29■□□□□ 0.36
SRSF4-206ENST00000605204 GMEB1Q9Y692 573 aa17.29■□□□□ 0.36
SRSF4-206ENST00000605204 UQCRHLA0A096LP55 91 aa17.28■□□□□ 0.36
SRSF4-206ENST00000605204 AGAP5A6NIR3 686 aa17.28■□□□□ 0.36
SRSF4-206ENST00000605204 NR5A2O00482 541 aa17.28■□□□□ 0.36
SRSF4-206ENST00000605204 EIF1AYO14602 144 aaKnown RBP17.28■□□□□ 0.36
SRSF4-206ENST00000605204 NTN1O95631 604 aa17.28■□□□□ 0.36
SRSF4-206ENST00000605204 DBIP07108 87 aaKnown RBP17.28■□□□□ 0.36
SRSF4-206ENST00000605204 PRKCAP17252 672 aa17.28■□□□□ 0.36
SRSF4-206ENST00000605204 CRATP43155 626 aa17.28■□□□□ 0.36
SRSF4-206ENST00000605204 CCR4P51679 360 aa17.28■□□□□ 0.36
SRSF4-206ENST00000605204 SUCLG1P53597 346 aaKnown RBP17.28■□□□□ 0.36
SRSF4-206ENST00000605204 MVDP53602 400 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms