RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 ASCL3Q9NQ33 180 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 KRT84Q9NSB2 600 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 MRPS14O60783 128 aaKnown RBP15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 MT-ND2P03891 347 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 CYC1P08574 325 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 OTX2P32243 289 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 CD97P48960 835 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 ST13P50502 369 aaKnown RBP15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 PDZK1Q5T2W1 519 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 SLC29A4Q7RTT9 530 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 CCDC71Q8IV32 467 aaPredicted RBP15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 OR11G2Q8NGC1 345 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 OR6T1Q8NGN1 323 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 PROX1Q92786 737 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF300Q96RE9 604 aaPredicted RBP15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 PINK1Q9BXM7 581 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 REEP1Q9H902 201 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 MTHFD2LQ9H903 347 aaPredicted RBP15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 THSD1Q9NS62 852 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 KIF17Q9P2E2 1029 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 RHCGQ9UBD6 479 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 NTNG1Q9Y2I2 539 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 TESMINQ9Y4I5 508 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 PTPRBP23467 1997 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 KNTC1P50748 2209 aa15.97■□□□□ 0.15
PPFIA3-207ENST00000602716 AHCTF1Q8WYP5 2266 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 PTPRZ1P23471 2315 aaPredicted RBP15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 DCDC2BA2VCK2 349 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 CDRT15L2A8MXV6 281 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 NPIPB9F8W1W9 429 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 FFAR1O14842 300 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 RGS10O43665 173 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 LGI1O95970 557 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 RAB40ALP0C0E4 278 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 MMP11P24347 488 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 DLSTP36957 453 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 BCAP31P51572 246 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 EEF1A1P68104 462 aaKnown RBP15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 FOXD4Q12950 439 aaPredicted RBP15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 GANABQ14697 944 aaKnown RBP15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 TGIF1Q15583 401 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 SMN1Q16637 294 aaKnown RBP15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 DEF8Q6ZN54 512 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 TMPRSS7Q7RTY8 843 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 CACTIN-AS1Q8N1I8 211 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 ZNF614Q8N883 585 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 ATG16L2Q8NAA4 619 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 OR4C3Q8NH37 302 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 NDNFQ8TB73 568 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 RHNO1Q9BSD3 238 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 HMG20AQ9NP66 347 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 CCNB1IP1Q9NPC3 277 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 CTPS2Q9NRF8 586 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 IL17BQ9UHF5 180 aa15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 FARSAQ9Y285 508 aaKnown RBP15.96■□□□□ 0.15
PPFIA3-207ENST00000602716 SYNDIG1LA6NDD5 238 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 TPST2O60704 377 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 IFNW1P05000 195 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 DRD5P21918 477 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 KRT20P35900 424 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 MVKQ03426 396 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 RSPO4Q2I0M5 234 aaPredicted RBP15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 MRPL2Q5T653 305 aaKnown RBP15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 HSDL2Q6YN16 418 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 BTLAQ7Z6A9 289 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 P2RY8Q86VZ1 359 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 PEX5LQ8IYB4 626 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 SVOPQ8N4V2 548 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 ZNF540Q8NDQ6 660 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 C7orf57Q8NEG2 295 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 EPYCQ99645 322 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 ARHGDIGQ99819 225 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 SPATA5L1Q9BVQ7 753 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 WDR12Q9GZL7 423 aaKnown RBP15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 ZNF700Q9H0M5 742 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 CFL2Q9Y281 166 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 ENPP4Q9Y6X5 453 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 DCHS1Q96JQ0 3298 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 OR6C76A6NM76 312 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 C17orf51A8MQB3 221 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 STMND1H3BQB6 276 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 FAM20BO75063 409 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 WBP4O75554 376 aaKnown RBP15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 IMPDH2P12268 514 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 PRKAR1BP31321 381 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 RRM2P31350 389 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 NPRL3Q12980 569 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 BTBD16Q32M84 506 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 NDUFAF6Q330K2 333 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 HLA-DQA1Q5Y7H0 255 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 TCTN3Q6NUS6 607 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 PRSS48Q7RTY5 328 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 IMMP1LQ96LU5 166 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 SIGLEC11Q96RL6 698 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 ZNF160Q9HCG1 818 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 ACOT13Q9NPJ3 140 aa15.95■□□□□ 0.14
PPFIA3-207ENST00000602716 M0R3G1 203 aa15.94■□□□□ 0.14
PPFIA3-207ENST00000602716 WWP2O00308 870 aa15.94■□□□□ 0.14
PPFIA3-207ENST00000602716 IL33O95760 270 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms