RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 T-ENOLP0DO92 83 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 PRKAR1BP31321 381 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 GCKP35557 465 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 UQCRFS1P47985 274 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 ZNF41P51814 821 aaPredicted RBP17.53■□□□□ 0.4
UPF1-209ENST00000600310 GFRA1P56159 465 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 EEFSECP57772 596 aaKnown RBP17.53■□□□□ 0.4
UPF1-209ENST00000600310 B3GALT5-AS1P59052 145 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 CBFBQ13951 182 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 PLPPR5Q32ZL2 321 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 CCDC80Q76M96 950 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 IFNEQ86WN2 208 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 GRAMD2AQ8IUY3 354 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 TMCO5AQ8N6Q1 288 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 GPR119Q8TDV5 335 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 SARAFQ96BY9 339 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 SFXN2Q96NB2 322 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 ARMC7Q9H6L4 198 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 SPAG4Q9NPE6 437 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 RLIMQ9NVW2 624 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 NDE1Q9NXR1 346 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 DNAJB12Q9NXW2 375 aaKnown RBP17.53■□□□□ 0.4
UPF1-209ENST00000600310 TMEM181Q9P2C4 612 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 USP22Q9UPT9 525 aa17.53■□□□□ 0.4
UPF1-209ENST00000600310 ELOVL7A1L3X0 281 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 C7orf72A4D263 438 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 NPIPA2E9PIF3 369 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 NPIPA3F8WFD2 350 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 PYCARD-AS1I3L0S3 204 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 M0QX08 132 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 BCKDKO14874 412 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 MFN2O95140 757 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 NUDT14O95848 222 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 ACTL6AO96019 429 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 LINGO3P0C6S8 592 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 ABOP16442 354 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 BMP7P18075 431 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 TCEA1P23193 301 aaKnown RBP17.52■□□□□ 0.4
UPF1-209ENST00000600310 CHMP24386 653 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 CCR4P51679 360 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 SLC25A3Q00325 362 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 CRYZQ08257 329 aaKnown RBP17.52■□□□□ 0.4
UPF1-209ENST00000600310 RAET1LQ5VY80 246 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 VASNQ6EMK4 673 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 AAGABQ6PD74 315 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 DHRS4L2Q6PKH6 230 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 C16orf89Q6UX73 402 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 PATL1Q86TB9 770 aaKnown RBP17.52■□□□□ 0.4
UPF1-209ENST00000600310 ZNF440Q8IYI8 595 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 MICU2Q8IYU8 434 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 CLIP4Q8N3C7 705 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 FAM57AQ8TBR7 257 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 ZBTB8AQ96BR9 441 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 PIGQQ9BRB3 760 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 RSPO3Q9BXY4 272 aaPredicted RBP17.52■□□□□ 0.4
UPF1-209ENST00000600310 VDAC3Q9Y277 283 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 NCKAP5O14513 1909 aa17.52■□□□□ 0.4
UPF1-209ENST00000600310 SVILO95425 2214 aa17.52■□□□□ 0.39
UPF1-209ENST00000600310 PRORSD1PA6NEY8 169 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 B2RBV5 119 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 LINC01387J3KSC0 135 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 STSP08842 583 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 ZNF17P17021 662 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 SLC6A8P48029 635 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 GSK3BP49841 420 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 MXRA7P84157 204 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 TOMM34Q15785 309 aaPredicted RBP17.51■□□□□ 0.39
UPF1-209ENST00000600310 EIF2S3LQ2VIR3 472 aaKnown RBP17.51■□□□□ 0.39
UPF1-209ENST00000600310 GTPBP8Q8N3Z3 284 aaPredicted RBP17.51■□□□□ 0.39
UPF1-209ENST00000600310 BHLHE22Q8NFJ8 381 aaPredicted RBP17.51■□□□□ 0.39
UPF1-209ENST00000600310 ABTB1Q969K4 478 aaPredicted RBP17.51■□□□□ 0.39
UPF1-209ENST00000600310 SLC35B4Q969S0 331 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 TIMP4Q99727 224 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 UGT2B28Q9BY64 529 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 ALG2Q9H553 416 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 GMPR2Q9P2T1 348 aaKnown RBP17.51■□□□□ 0.39
UPF1-209ENST00000600310 TNFRSF10DQ9UBN6 386 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 OSGIN2Q9Y236 505 aa17.51■□□□□ 0.39
UPF1-209ENST00000600310 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 OR2M5A3KFT3 312 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 CFAP73A6NFT4 308 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ETV2O00321 342 aaPredicted RBP17.5■□□□□ 0.39
UPF1-209ENST00000600310 PRRG2O14669 202 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ADAM11O75078 769 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 PGCP20142 388 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 PSMA4P25789 261 aaKnown RBP17.5■□□□□ 0.39
UPF1-209ENST00000600310 ADH6P28332 368 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 CPOXP36551 454 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 EIF1P41567 113 aaKnown RBP17.5■□□□□ 0.39
UPF1-209ENST00000600310 DMTNQ08495 405 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 QPRTQ15274 297 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 GXYLT1Q4G148 440 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 SLC25A53Q5H9E4 307 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 WLSQ5T9L3 541 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ZNF550Q7Z398 422 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ARMC8Q8IUR7 673 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 RBM15BQ8NDT2 890 aaKnown RBP17.5■□□□□ 0.39
UPF1-209ENST00000600310 OR5M1Q8NGP8 315 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 POC1BQ8TC44 478 aa17.5■□□□□ 0.39
UPF1-209ENST00000600310 ZNF524Q96C55 264 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms