RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 RNF4P78317 190 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 CHRNB3Q05901 458 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 GPR68Q15743 365 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 CYP27C1Q4G0S4 372 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 GLIPR1L2Q4G1C9 344 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 FAM98BQ52LJ0 330 aaKnown RBP11.58□□□□□ -0.56
UPF1-208ENST00000600012 SPNS3Q6ZMD2 512 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 ZAR1Q86SH2 424 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 CD163Q86VB7 1156 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 ARMC8Q8IUR7 673 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 SULF2Q8IWU5 870 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 PRR22Q8IZ63 422 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 CYP4Z2PQ8N1L4 340 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 GPR32P1Q8NGA4 272 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 LCORQ96JN0 433 aaPredicted RBP11.58□□□□□ -0.56
UPF1-208ENST00000600012 ZNF607Q96SK3 696 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 PKP2Q99959 881 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
UPF1-208ENST00000600012 STX18Q9P2W9 335 aaKnown RBP11.58□□□□□ -0.56
UPF1-208ENST00000600012 CBLCQ9ULV8 474 aa11.58□□□□□ -0.56
UPF1-208ENST00000600012 PPIEQ9UNP9 301 aaKnown RBP11.58□□□□□ -0.56
UPF1-208ENST00000600012 AKAP9Q99996 3911 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 A0A1B0GTH9 108 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 FRG2CA6NGY1 282 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 PEX1O43933 1283 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 KIAA0513O60268 411 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 STX11O75558 287 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 IFNA14P01570 189 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 SEMG1P04279 462 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 RAP2AP10114 183 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 ETS2P15036 469 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 PIGAP37287 484 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 RNF144AP50876 292 aaPredicted RBP11.57□□□□□ -0.56
UPF1-208ENST00000600012 SELENOWP63302 87 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 FLYWCH1Q4VC44 716 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 TMEM211Q6ICI0 200 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 HMBOX1Q6NT76 420 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 HSDL2Q6YN16 418 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 C16orf47Q6ZP98 133 aaPredicted RBP11.57□□□□□ -0.56
UPF1-208ENST00000600012 FKBP9P1Q75LS8 142 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 COMTD1Q86VU5 262 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 VRK2Q86Y07 508 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 KRT73Q86Y46 540 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 LILRA2Q8N149 483 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 ZNF619Q8N2I2 560 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 PQLC1Q8N2U9 271 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 TMEM156Q8N614 296 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 ZNF441Q8N8Z8 693 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 ZFP62Q8NB50 900 aaPredicted RBP11.57□□□□□ -0.56
UPF1-208ENST00000600012 PAPD5Q8NDF8 572 aaKnown RBP11.57□□□□□ -0.56
UPF1-208ENST00000600012 ASB5Q8WWX0 329 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 LRTOMTQ8WZ04 291 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 EFHD2Q96C19 240 aaPredicted RBP11.57□□□□□ -0.56
UPF1-208ENST00000600012 ZG16BQ96DA0 208 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 DOHHQ9BU89 302 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 MAGIXQ9H6Y5 334 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 ARMC1Q9NVT9 282 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 MTORP42345 2549 aa11.57□□□□□ -0.56
UPF1-208ENST00000600012 EML6Q6ZMW3 1958 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 SETD2Q9BYW2 2564 aaPredicted RBP11.56□□□□□ -0.56
UPF1-208ENST00000600012 hCG_2039718K7EN88 272 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 HS6ST1O60243 411 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 CDC40O60508 579 aaKnown RBP eCLIP11.56□□□□□ -0.56
UPF1-208ENST00000600012 ITGA10O75578 1167 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 SERPINB7O75635 380 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 PABPC4LP0CB38 370 aaKnown RBP11.56□□□□□ -0.56
UPF1-208ENST00000600012 IGFBP2P18065 325 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 ATP6V1C1P21283 382 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 DRD5P21918 477 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 CHRNB4P30926 498 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 RFC3P40938 356 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 KCNJ5P48544 419 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 DCAF7P61962 342 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 KCNJ10P78508 379 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 SNCBQ16143 134 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 MAPK14Q16539 360 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 DUSP7Q16829 419 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 IFI44LQ53G44 452 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 CMPK2Q5EBM0 449 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 ARHGAP11AQ6P4F7 1023 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 MARVELD2Q8N4S9 558 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 OR52P1PQ8NH57 321 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 SPPL2AQ8TCT8 520 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 TMBIM1Q969X1 311 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 SPATA5L1Q9BVQ7 753 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 CHID1Q9BWS9 393 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 SAP130Q9H0E3 1048 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 TP63Q9H3D4 680 aaPredicted RBP11.56□□□□□ -0.56
UPF1-208ENST00000600012 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 KCNE5Q9UJ90 142 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 RIMS3Q9UJD0 308 aa11.56□□□□□ -0.56
UPF1-208ENST00000600012 ZNF443Q9Y2A4 671 aaPredicted RBP11.56□□□□□ -0.56
UPF1-208ENST00000600012 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 PRAMEF25A6NGN4 478 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 WWP2O00308 870 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 UGT2B17O75795 530 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 SOX30O94993 753 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 EPPINO95925 133 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 FESP07332 822 aa11.55□□□□□ -0.56
UPF1-208ENST00000600012 RPS4Y1P22090 263 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms