RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SCN2BO60939 215 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 GUSBP08236 651 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 PGCP20142 388 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 ELK4P28324 431 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 POLR2JP52435 117 aaKnown RBP12.74□□□□□ -0.37
LIG1-218ENST00000599322 CASP9P55211 416 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 CLDN20P56880 219 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 SORDQ00796 357 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 ZNF117Q03924 483 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 PON3Q15166 354 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 CD226Q15762 336 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 PLPPR5Q32ZL2 321 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 C6orf10Q5SRN2 563 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 PDZK1Q5T2W1 519 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 HBMQ6B0K9 141 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 EPGNQ6UW88 154 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 MSANTD1Q6ZTZ1 278 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 LUZP2Q86TE4 346 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 ZNF295-AS1Q8N0V1 137 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 LILRA2Q8N149 483 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 ZNF619Q8N2I2 560 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 METTL25Q8N6Q8 603 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 RELL2Q8NC24 303 aaPredicted RBP12.74□□□□□ -0.37
LIG1-218ENST00000599322 RAB8BQ92930 207 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 ZNF845Q96IR2 970 aaPredicted RBP12.74□□□□□ -0.37
LIG1-218ENST00000599322 RAD21L1Q9H4I0 556 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 THUMPD1Q9NXG2 353 aaKnown RBP12.74□□□□□ -0.37
LIG1-218ENST00000599322 CALML5Q9NZT1 146 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 EMC9Q9Y3B6 208 aa12.74□□□□□ -0.37
LIG1-218ENST00000599322 A0A1W2PNV4 684 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 FAM234BA2RU67 622 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 KDM4EB2RXH2 506 aaPredicted RBP12.73□□□□□ -0.37
LIG1-218ENST00000599322 SHISA8B8ZZ34 492 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 MSTNO14793 375 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 TGM6O95932 706 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 GSNP06396 782 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 NR2F1P10589 423 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 UQCRBP14927 111 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 SLC7A1P30825 629 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 KCNJ5P48544 419 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 SUCLG1P53597 346 aaKnown RBP12.73□□□□□ -0.37
LIG1-218ENST00000599322 CARD18P57730 90 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 PHC1P78364 1004 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 ZNF141Q15928 474 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 TMEM44Q2T9K0 475 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 TTMPQ5BVD1 217 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 HEPHL1Q6MZM0 1159 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 RNF130Q86XS8 419 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 ZZZ3Q8IYH5 903 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 ZNF563Q8TA94 476 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 FNDC9Q8TBE3 224 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 PMM1Q92871 262 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 MARK4Q96L34 752 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 MRGPRX4Q96LA9 322 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 TEX37Q96LM6 180 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 KLHL15Q96M94 604 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 TRNT1Q96Q11 434 aaKnown RBP12.73□□□□□ -0.37
LIG1-218ENST00000599322 OR52B2Q96RD2 323 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 SH3GL2Q99962 352 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 CCDC28BQ9BUN5 200 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 ZNF350Q9GZX5 532 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 LAT2Q9GZY6 243 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 SDR39U1Q9NRG7 319 aaPredicted RBP12.73□□□□□ -0.37
LIG1-218ENST00000599322 GLRX2Q9NS18 164 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 L3MBTL1Q9Y468 752 aa12.73□□□□□ -0.37
LIG1-218ENST00000599322 SPIN1Q9Y657 262 aaPredicted RBP12.73□□□□□ -0.37
LIG1-218ENST00000599322 INTS1Q8N201 2190 aaKnown RBP12.72□□□□□ -0.37
LIG1-218ENST00000599322 B4DXG7 233 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 C9JVG2 144 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 NPIPB9F8W1W9 429 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 ZNF195O14628 629 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 FCMRO60667 390 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 LINGO3P0C6S8 592 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 H2AFXP16104 143 aaPredicted RBP12.72□□□□□ -0.37
LIG1-218ENST00000599322 IL12AP29459 219 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 SFTPDP35247 375 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 CPOXP36551 454 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 CRATP43155 626 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 SLC6A8P48029 635 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 AQP5P55064 265 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 DLX5P56178 289 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 SIRPAP78324 504 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 FOXF2Q12947 444 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 STK32CQ86UX6 486 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 ATP6V1C2Q8NEY4 427 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 OR10D3Q8NH80 312 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 FBXO27Q8NI29 283 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 ST8SIA1Q92185 356 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 FIG4Q92562 907 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 OSTF1Q92882 214 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 ARSGQ96EG1 525 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 MAGEB18Q96M61 343 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 INPP5KQ9BT40 448 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 THUMPD3Q9BV44 507 aaKnown RBP12.72□□□□□ -0.37
LIG1-218ENST00000599322 RABEP2Q9H5N1 569 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 ARMC7Q9H6L4 198 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
LIG1-218ENST00000599322 MTHFD2LQ9H903 347 aaPredicted RBP12.72□□□□□ -0.37
LIG1-218ENST00000599322 P2RX2Q9UBL9 471 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms