RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 HBMQ6B0K9 141 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 GTF2IRD2BQ6EKJ0 949 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 HEPHL1Q6MZM0 1159 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 GTF2IRD2Q86UP8 949 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 LILRA2Q8N149 483 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF610Q8N9Z0 462 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 TOR1AIP2Q8NFQ8 470 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 OR4A15Q8NGL6 344 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 OSTF1Q92882 214 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 WFIKKN1Q96NZ8 548 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 ALPK1Q96QP1 1244 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 EXD2Q9NVH0 621 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 PLEKHA6Q9Y2H5 1048 aa16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 HRNRQ86YZ3 2850 aaPredicted RBP16.06■□□□□ 0.16
CHMP2A-203ENST00000597209 SERINC4A6NH21 518 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 GJE1A6NN92 205 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 C16orf97H3BN30 126 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 ETV2O00321 342 aaPredicted RBP16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF195O14628 629 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF264O43296 627 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 EFNA2O43921 213 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 DNAJA2O60884 412 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 ATE1O95260 518 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 NTN1O95631 604 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 NID1P14543 1247 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 CTBP2P56545 445 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 WDR4P57081 412 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 CARD18P57730 90 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 RPS26P62854 115 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 SAXO2Q658L1 398 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 SPATA19Q7Z5L4 167 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 OR5W2Q8NH69 310 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 FBXO27Q8NI29 283 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 RAB3IL1Q8TBN0 382 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 MRGPRX4Q96LA9 322 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 PAIP2Q9BPZ3 127 aaKnown RBP16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF350Q9GZX5 532 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 TIGARQ9NQ88 270 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 POLE3Q9NRF9 147 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 THAP1Q9NVV9 213 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF226Q9NYT6 803 aa16.05■□□□□ 0.16
CHMP2A-203ENST00000597209 TMEM120BA0PK00 339 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 E9PBE3 544 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 SDHDO14521 159 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 SNNO75324 88 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 NUDT14O95848 222 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 PLGP00747 810 aaPredicted RBP16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 OPN1LWP04000 364 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 PABPC4LP0CB38 370 aaKnown RBP16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 UBL4AP11441 157 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 PRKCAP17252 672 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 CRYGSP22914 178 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 KCNJ5P48544 419 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 SPANXN4Q5MJ08 99 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 PDZK1Q5T2W1 519 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 CLEC4FQ8N1N0 589 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 ANKRD42Q8N9B4 389 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 NEURL3Q96EH8 262 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 LAT2Q9GZY6 243 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 OR51I1Q9H343 314 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 TMEM185BQ9H7F4 350 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 BTNL2Q9UIR0 455 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 KCNE5Q9UJ90 142 aa16.04■□□□□ 0.16
CHMP2A-203ENST00000597209 MED13LQ71F56 2210 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 HDAC3O15379 428 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 FCMRO60667 390 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 UGT2B17O75795 530 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 CPSF4O95639 269 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 ALDOCP09972 364 aaKnown RBP16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 CCKARP32238 428 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 S100A3P33764 101 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 LRRC74AQ0VAA2 488 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 CBFBQ13951 182 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 GPR68Q15743 365 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 TOMM34Q15785 309 aaPredicted RBP16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 ATAD3BQ5T9A4 648 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 PPP4R4Q6NUP7 873 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 C16orf62Q7Z3J2 963 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 ANKRD46Q86W74 232 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 ZNF614Q8N883 585 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 RNF128Q8TEB7 428 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 CPNE4Q96A23 557 aaPredicted RBP16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 CCDC115Q96NT0 180 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 MED18Q9BUE0 208 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 TMUB1Q9BVT8 246 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 SAP130Q9H0E3 1048 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 GP6Q9HCN6 339 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 FANCFQ9NPI8 374 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 AIG1Q9NVV5 245 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 KLHL28Q9NXS3 571 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 CLEC4AQ9UMR7 237 aa16.03■□□□□ 0.16
CHMP2A-203ENST00000597209 A0A1W2PPR1 153 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 TRPC5OSA6NMA1 111 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 DEFB108AA8MXU0 73 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 SLCO1B7G3V0H7 640 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 KIAA0513O60268 411 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 ERLIN1O75477 346 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 OR12D1P0DN82 309 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 PPP3CBP16298 524 aa16.02■□□□□ 0.16
CHMP2A-203ENST00000597209 SHC1P29353 583 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms