RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 DNAJC13O75165 2243 aa10.03□□□□□ -0.8
LIG1-211ENST00000596457 KIAA1549Q9HCM3 1950 aa10.03□□□□□ -0.8
LIG1-211ENST00000596457 A0A087WZY1 265 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 FBP2O00757 339 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 MRASO14807 208 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 EIF4E2O60573 245 aaKnown RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 CCDC22O60826 627 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 TFPTP0C1Z6 253 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 GLI4P10075 376 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 PEPDP12955 493 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 LHX2P50458 406 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 CRISP3P54108 245 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 MTPNP58546 118 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 KCNJ10P78508 379 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 FADDQ13158 208 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 CBFBQ13951 182 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 CYLC2Q14093 348 aaPredicted RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 SELPLGQ14242 412 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 GNA13Q14344 377 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 SF3B4Q15427 424 aaKnown RBP eCLIP10.02□□□□□ -0.815e-15■□□□□ 11.3
LIG1-211ENST00000596457 MAPK11Q15759 364 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 TOMM34Q15785 309 aaPredicted RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 GLYR1Q49A26 553 aaPredicted RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 GCNT6Q5T4J0 391 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 REP15Q6BDI9 236 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 POMZP3Q6PJE2 187 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 MTDHQ86UE4 582 aaKnown RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 VRK2Q86Y07 508 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 PEX5LQ8IYB4 626 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 MEIOBQ8N635 442 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 TOR1AIP2Q8NFQ8 470 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 FBXO27Q8NI29 283 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 ZNF563Q8TA94 476 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 GPR119Q8TDV5 335 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 TSPEARQ8WU66 669 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 PHF10Q8WUB8 498 aaKnown RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 SLC38A5Q8WUX1 472 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 ITLN2Q8WWU7 325 aaPredicted RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 RNF145Q96MT1 663 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 CGREF1Q99674 301 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 TUBA1CQ9BQE3 449 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 CPPED1Q9BRF8 314 aaPredicted RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 PRDM14Q9GZV8 571 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 LAT2Q9GZY6 243 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 PIF1Q9H611 641 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 TMEM185BQ9H7F4 350 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 MRGBPQ9NV56 204 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 THUMPD1Q9NXG2 353 aaKnown RBP10.02□□□□□ -0.81
LIG1-211ENST00000596457 CORO2BQ9UQ03 480 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 RNF6Q9Y252 685 aa10.02□□□□□ -0.81
LIG1-211ENST00000596457 TRBV5-3A0A0A0MS03 114 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 A0A0G2JPF8 293 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 HNRNPCL2B2RXH8 293 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 HNRNPCL3B7ZW38 293 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 H0YC42 278 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 EIF1AYO14602 144 aaKnown RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 HNRNPCL1O60812 293 aaKnown RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 BCAS1O75363 584 aaPredicted RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 CLDN1O95832 211 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 DBIP07108 87 aaKnown RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 GUSBP08236 651 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 HOXD4P09016 255 aaPredicted RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 HNRNPCL4P0DMR1 293 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 COL8A1P27658 744 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 MAGEA8P43361 318 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 SUCLG1P53597 346 aaKnown RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 TPD52P55327 224 aaPredicted RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 CLDN18P56856 261 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 FOXF1Q12946 379 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 QPRTQ15274 297 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 SGCBQ16585 318 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 CYP51A1Q16850 503 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 ACSF3Q4G176 576 aaPredicted RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 XKRXQ6PP77 449 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 P4HA3Q7Z4N8 544 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 C10orf111Q8N326 155 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 ZNF808Q8N4W9 903 aaPredicted RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 DPP10Q8N608 796 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 TNIP2Q8NFZ5 429 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 OR52P1PQ8NH57 321 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 OR5W2Q8NH69 310 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 POC1BQ8TC44 478 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 CA5BP1Q8WTZ4 195 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 CNOT9Q92600 299 aaKnown RBP10.01□□□□□ -0.81
LIG1-211ENST00000596457 ZBTB8AQ96BR9 441 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 ANKRD27Q96NW4 1050 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 IKZF5Q9H5V7 419 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 A4GALTQ9NPC4 353 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 ICAM5Q9UMF0 924 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 SLC35A3Q9Y2D2 325 aa10.01□□□□□ -0.81
LIG1-211ENST00000596457 A0A0G2JNJ9 132 aa10□□□□□ -0.81
LIG1-211ENST00000596457 AGAP5A6NIR3 686 aa10□□□□□ -0.81
LIG1-211ENST00000596457 FAM90A27PA6NNH2 459 aa10□□□□□ -0.81
LIG1-211ENST00000596457 CLCA1A8K7I4 914 aa10□□□□□ -0.81
LIG1-211ENST00000596457 PRSS44E7EML9 344 aa10□□□□□ -0.81
LIG1-211ENST00000596457 SNX3O60493 162 aa10□□□□□ -0.81
LIG1-211ENST00000596457 EPPINO95925 133 aa10□□□□□ -0.81
LIG1-211ENST00000596457 IL2RAP01589 272 aa10□□□□□ -0.81
LIG1-211ENST00000596457 LINGO3P0C6S8 592 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms