RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 H3BNH8 94 aa21.29■■□□□ 1
LSM4-202ENST00000593564 ZNF195O14628 629 aa21.29■■□□□ 1
LSM4-202ENST00000593564 OIP5O43482 229 aa21.29■■□□□ 1
LSM4-202ENST00000593564 NPHS1O60500 1241 aa21.29■■□□□ 1
LSM4-202ENST00000593564 SOX30O94993 753 aa21.29■■□□□ 1
LSM4-202ENST00000593564 NUDT14O95848 222 aa21.29■■□□□ 1
LSM4-202ENST00000593564 KRT16P08779 473 aa21.29■■□□□ 1
LSM4-202ENST00000593564 LAMP1P11279 417 aa21.29■■□□□ 1
LSM4-202ENST00000593564 P2RX1P51575 399 aa21.29■■□□□ 1
LSM4-202ENST00000593564 PPP2R2BQ00005 443 aa21.29■■□□□ 1
LSM4-202ENST00000593564 DCST2Q5T1A1 773 aa21.29■■□□□ 1
LSM4-202ENST00000593564 NUFIP2Q7Z417 695 aaKnown RBP21.29■■□□□ 1
LSM4-202ENST00000593564 TUSC5Q8IXB3 177 aa21.29■■□□□ 1
LSM4-202ENST00000593564 OR56A1Q8NGH5 318 aa21.29■■□□□ 1
LSM4-202ENST00000593564 RAB3IL1Q8TBN0 382 aa21.29■■□□□ 1
LSM4-202ENST00000593564 OR5P2Q8WZ92 322 aa21.29■■□□□ 1
LSM4-202ENST00000593564 PPP3R2Q96LZ3 170 aa21.29■■□□□ 1
LSM4-202ENST00000593564 GPATCH2Q9NW75 528 aa21.29■■□□□ 1
LSM4-202ENST00000593564 CARD8Q9Y2G2 431 aa21.29■■□□□ 1
LSM4-202ENST00000593564 ANK3Q12955 4377 aaKnown RBP21.28■■□□□ 1
LSM4-202ENST00000593564 NPIPA5A0A0B4J1W7 369 aa21.28■■□□□ 1
LSM4-202ENST00000593564 INAFM1C9JVW0 142 aa21.28■■□□□ 1
LSM4-202ENST00000593564 NPIPA7E9PJI5 369 aa21.28■■□□□ 1
LSM4-202ENST00000593564 NPIPA8P0DM63 369 aa21.28■■□□□ 1
LSM4-202ENST00000593564 ALDH3A1P30838 453 aa21.28■■□□□ 1
LSM4-202ENST00000593564 CCT3P49368 545 aaKnown RBP21.28■■□□□ 1
LSM4-202ENST00000593564 CAPRIN1Q14444 709 aaKnown RBP21.28■■□□□ 1
LSM4-202ENST00000593564 TMEM176BQ3YBM2 270 aaPredicted RBP21.28■■□□□ 1
LSM4-202ENST00000593564 XKR7Q5GH72 579 aa21.28■■□□□ 1
LSM4-202ENST00000593564 ARL13AQ5H913 290 aaPredicted RBP21.28■■□□□ 1
LSM4-202ENST00000593564 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.28■■□□□ 1
LSM4-202ENST00000593564 SFRP5Q5T4F7 317 aa21.28■■□□□ 1
LSM4-202ENST00000593564 FCRLAQ7L513 359 aa21.28■■□□□ 1
LSM4-202ENST00000593564 NATD1Q8N6N6 113 aa21.28■■□□□ 1
LSM4-202ENST00000593564 ADAMTS15Q8TE58 950 aa21.28■■□□□ 1
LSM4-202ENST00000593564 APOPT1Q96IL0 206 aa21.28■■□□□ 1
LSM4-202ENST00000593564 COQ10BQ9H8M1 238 aa21.28■■□□□ 1
LSM4-202ENST00000593564 EML4Q9HC35 981 aaKnown RBP21.28■■□□□ 1
LSM4-202ENST00000593564 GIMAP2Q9UG22 337 aa21.28■■□□□ 1
LSM4-202ENST00000593564 FAF1Q9UNN5 650 aaPredicted RBP21.28■■□□□ 1
LSM4-202ENST00000593564 LAMP3Q9UQV4 416 aa21.28■■□□□ 1
LSM4-202ENST00000593564 RNF115Q9Y4L5 304 aa21.28■■□□□ 1
LSM4-202ENST00000593564 KIAA1324LA8MWY0 1029 aaPredicted RBP21.27■■□□□ 1
LSM4-202ENST00000593564 NPIPB9F8W1W9 429 aa21.27■■□□□ 1
LSM4-202ENST00000593564 LYPLA1O75608 230 aaPredicted RBP21.27■■□□□ 1
LSM4-202ENST00000593564 PRKD3O94806 890 aa21.27■■□□□ 1
LSM4-202ENST00000593564 NTN1O95631 604 aa21.27■■□□□ 1
LSM4-202ENST00000593564 ATP12AP54707 1039 aa21.27■■□□□ 1
LSM4-202ENST00000593564 RPS4XP62701 263 aaKnown RBP21.27■■□□□ 1
LSM4-202ENST00000593564 TP53BP2Q13625 1128 aa21.27■■□□□ 1
LSM4-202ENST00000593564 ALKBH2Q6NS38 261 aa21.27■■□□□ 1
LSM4-202ENST00000593564 LRRN4CLQ8ND94 238 aa21.27■■□□□ 1
LSM4-202ENST00000593564 GPR119Q8TDV5 335 aa21.27■■□□□ 1
LSM4-202ENST00000593564 ZFP90Q8TF47 636 aa21.27■■□□□ 1
LSM4-202ENST00000593564 MRGPRX4Q96LA9 322 aa21.27■■□□□ 1
LSM4-202ENST00000593564 CXorf36Q9H7Y0 433 aa21.27■■□□□ 1
LSM4-202ENST00000593564 NGBQ9NPG2 151 aa21.27■■□□□ 1
LSM4-202ENST00000593564 ATAD3AQ9NVI7 634 aa21.27■■□□□ 1
LSM4-202ENST00000593564 GTPBP1O00178 669 aaKnown RBP21.26■□□□□ 0.99
LSM4-202ENST00000593564 PEX11AO75192 247 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 YES1P07947 543 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 PRKCAP17252 672 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 IL32P24001 234 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 RNF144AP50876 292 aaPredicted RBP21.26■□□□□ 0.99
LSM4-202ENST00000593564 SELENBP1Q13228 472 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 PTGR1Q14914 329 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 TSC22D1Q15714 1073 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 TAB1Q15750 504 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 TOMM34Q15785 309 aaPredicted RBP21.26■□□□□ 0.99
LSM4-202ENST00000593564 LSM12Q3MHD2 195 aaKnown RBP21.26■□□□□ 0.99
LSM4-202ENST00000593564 SPDYE7PQ495Y7 208 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 NCMAPQ5T1S8 102 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 SLC43A2Q8N370 569 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 BANPQ8N9N5 519 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 LILRB1Q8NHL6 650 aaPredicted RBP21.26■□□□□ 0.99
LSM4-202ENST00000593564 SFXN5Q8TD22 340 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 HSD17B8Q92506 261 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 MOAP1Q96BY2 351 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 COQ8BQ96D53 544 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 USB1Q9BQ65 265 aaKnown RBP21.26■□□□□ 0.99
LSM4-202ENST00000593564 DTNAQ9Y4J8 743 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 KCNE3Q9Y6H6 103 aa21.26■□□□□ 0.99
LSM4-202ENST00000593564 OVOL3O00110 214 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 C6orf47O95873 294 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 CD3EP07766 207 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 TNK1Q13470 666 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 P2RY6Q15077 328 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 NDUFAF6Q330K2 333 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 ATP6AP1LQ52LC2 224 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 SLC25A53Q5H9E4 307 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 KISS1RQ969F8 398 aaPredicted RBP21.25■□□□□ 0.99
LSM4-202ENST00000593564 FBXW5Q969U6 566 aa21.25■□□□□ 0.99
LSM4-202ENST00000593564 PRPF18Q99633 342 aaKnown RBP21.25■□□□□ 0.99
LSM4-202ENST00000593564 ESRP2Q9H6T0 727 aaKnown RBP21.25■□□□□ 0.99
LSM4-202ENST00000593564 ETV2O00321 342 aaPredicted RBP21.24■□□□□ 0.99
LSM4-202ENST00000593564 ADAP00813 363 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 ENPP1P22413 925 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 RAC3P60763 192 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 ETFDHQ16134 617 aa21.24■□□□□ 0.99
LSM4-202ENST00000593564 C6orf136Q5SQH8 315 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms