RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 PCDHGB4Q9UN71 923 aa18.1■□□□□ 0.49
CIRBP-239ENST00000592467 TUBAL3A6NHL2 446 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 STX11O75558 287 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 OR12D1P0DN82 309 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 EPXP11678 715 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 PRKCAP17252 672 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 PCYT1AP49585 367 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 RPS3AP61247 264 aaKnown RBP18.09■□□□□ 0.49
CIRBP-239ENST00000592467 PLAURQ03405 335 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 MAPK14Q16539 360 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 SLC25A53Q5H9E4 307 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 TYW3Q6IPR3 259 aaKnown RBP18.09■□□□□ 0.49
CIRBP-239ENST00000592467 TNFAIP8L2Q6P589 184 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-239ENST00000592467 VPS37AQ8NEZ2 397 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 RAB8BQ92930 207 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 OR52B2Q96RD2 323 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 SAP130Q9H0E3 1048 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 TMEM185BQ9H7F4 350 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 MKLN1Q9UL63 735 aa18.09■□□□□ 0.49
CIRBP-239ENST00000592467 SERINC4A6NH21 518 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 CXCL13O43927 109 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 KIAA0513O60268 411 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 EIF4E2O60573 245 aaKnown RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 BCAS1O75363 584 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 PGRP06401 933 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 ELK4P28324 431 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 ADH6P28332 368 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 DNAJA1P31689 397 aaKnown RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 EIF1P41567 113 aaKnown RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 EIF1AXP47813 144 aaKnown RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 SKP2Q13309 424 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 GPR68Q15743 365 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 PDCD4Q53EL6 469 aaKnown RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 TTMPQ5BVD1 217 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 ESPNLQ6ZVH7 1005 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 CNEP1R1Q8N9A8 125 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 OR2V1Q8NHB1 315 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 FBXO27Q8NI29 283 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 PIWIL2Q8TC59 973 aaKnown RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 SLC35A5Q9BS91 424 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 OPN3Q9H1Y3 402 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-239ENST00000592467 LIME1Q9H400 295 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 HIVEP1P15822 2718 aa18.08■□□□□ 0.48
CIRBP-239ENST00000592467 H3BNH8 94 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 HMGN4O00479 90 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 TNFSF11O14788 317 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 ZNF264O43296 627 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 CD8BP10966 210 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 UBL4AP11441 157 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 CCKARP32238 428 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 SIRPAP78324 504 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 FAM27E3Q08E93 113 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 SGCBQ16585 318 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 FRRS1Q6ZNA5 592 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 LILRA2Q8N149 483 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 FAM71CQ8NEG0 241 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 OR5W2Q8NH69 310 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 XAGE5Q8WWM1 108 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 ROPN1LQ96C74 230 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 ZG16BQ96DA0 208 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 MARK4Q96L34 752 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 POLDIP3Q9BY77 421 aaKnown RBP18.07■□□□□ 0.48
CIRBP-239ENST00000592467 CLEC4MQ9H2X3 399 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-239ENST00000592467 SDR39U1Q9NRG7 319 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-239ENST00000592467 SLC6A13Q9NSD5 602 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 EXD2Q9NVH0 621 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 STOML1Q9UBI4 398 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 ITGB1BP2Q9UKP3 347 aa18.07■□□□□ 0.48
CIRBP-239ENST00000592467 GPC6Q9Y625 555 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-239ENST00000592467 AKAP6Q13023 2319 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 CCDC154A6NI56 674 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 GTPBP1O00178 669 aaKnown RBP18.06■□□□□ 0.48
CIRBP-239ENST00000592467 SMNDC1O75940 238 aaKnown RBP eCLIP18.06■□□□□ 0.48
CIRBP-239ENST00000592467 AGR2O95994 175 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 FCGR2AP12318 317 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 PGM1P36871 562 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 CPA2P48052 419 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 FGFBP1Q14512 234 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 FAM214BQ7L5A3 538 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 C16orf62Q7Z3J2 963 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 CDC20BQ86Y33 519 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 ZNF614Q8N883 585 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 ZNF610Q8N9Z0 462 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 GLB1L3Q8NCI6 653 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-239ENST00000592467 KLHL15Q96M94 604 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 DACH2Q96NX9 599 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 OR52E6Q96RD3 313 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 SRXN1Q9BYN0 137 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 LAT2Q9GZY6 243 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 COQ10BQ9H8M1 238 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 POLE3Q9NRF9 147 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 PAQR5Q9NXK6 330 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-239ENST00000592467 ABCA4P78363 2273 aa18.06■□□□□ 0.48
CIRBP-239ENST00000592467 TEP1Q99973 2627 aaKnown RBP18.05■□□□□ 0.48
CIRBP-239ENST00000592467 SS18L1O75177 396 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-239ENST00000592467 IDO1P14902 403 aa18.05■□□□□ 0.48
CIRBP-239ENST00000592467 KHKP50053 298 aa18.05■□□□□ 0.48
CIRBP-239ENST00000592467 MVDP53602 400 aa18.05■□□□□ 0.48
CIRBP-239ENST00000592467 QPRTQ15274 297 aa18.05■□□□□ 0.48
CIRBP-239ENST00000592467 MAPK11Q15759 364 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms