RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 RGNQ15493 299 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 ZNF630Q2M218 657 aaPredicted RBP10.39□□□□□ -0.75
VMP1-211ENST00000591315 SP5Q6BEB4 398 aaPredicted RBP10.39□□□□□ -0.75
VMP1-211ENST00000591315 AAGABQ6PD74 315 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 POMZP3Q6PJE2 187 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 ENPP6Q6UWR7 440 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 GTPBP8Q8N3Z3 284 aaPredicted RBP10.39□□□□□ -0.75
VMP1-211ENST00000591315 TMCO5AQ8N6Q1 288 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 ZNF527Q8NB42 609 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 LILRB4Q8NHJ6 448 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 SLC38A5Q8WUX1 472 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 C10orf82Q8WW14 230 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 ZNF845Q96IR2 970 aaPredicted RBP10.39□□□□□ -0.75
VMP1-211ENST00000591315 TRNT1Q96Q11 434 aaKnown RBP10.39□□□□□ -0.75
VMP1-211ENST00000591315 THUMPD3Q9BV44 507 aaKnown RBP10.39□□□□□ -0.75
VMP1-211ENST00000591315 RABEP2Q9H5N1 569 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 SAR1AQ9NR31 198 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 LRBAP50851 2863 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 APCP25054 2843 aa10.39□□□□□ -0.75
VMP1-211ENST00000591315 H3BNH8 94 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 AP3D1O14617 1153 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 ZNF264O43296 627 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 CSTAP01040 98 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 BCHEP06276 602 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 MSX1P28360 303 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 CEACAM8P31997 349 aaPredicted RBP10.38□□□□□ -0.75
VMP1-211ENST00000591315 RYKP34925 604 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 GCKP35557 465 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 P2RX1P51575 399 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 ZNF136P52737 540 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 KLF10Q13118 480 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 CAPRIN1Q14444 709 aaKnown RBP10.38□□□□□ -0.75
VMP1-211ENST00000591315 FGFBP1Q14512 234 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 QPRTQ15274 297 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 RIPPLY2Q5TAB7 128 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 AP1ARQ63HQ0 302 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 NSUN5P2Q63ZY6 315 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 LRRC74BQ6ZQY2 392 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 MTERF4Q7Z6M4 381 aaKnown RBP10.38□□□□□ -0.75
VMP1-211ENST00000591315 ADGRE4PQ86SQ3 457 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 GGNQ86UU5 652 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 VRK2Q86Y07 508 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 MISPQ8IVT2 679 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 PM20D2Q8IYS1 436 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 EID3Q8N140 333 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 ATP6V1C2Q8NEY4 427 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 FBXO27Q8NI29 283 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 ZPLD1Q8TCW7 415 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 CA5BP1Q8WTZ4 195 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 FIG4Q92562 907 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 TMEM19Q96HH6 336 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 PIGQQ9BRB3 760 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 CPPED1Q9BRF8 314 aaPredicted RBP10.38□□□□□ -0.75
VMP1-211ENST00000591315 SIKE1Q9BRV8 207 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 LAT2Q9GZY6 243 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 NPDC1Q9NQX5 325 aaPredicted RBP10.38□□□□□ -0.75
VMP1-211ENST00000591315 RLIMQ9NVW2 624 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 ARMCX1Q9P291 453 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 CLCF1Q9UBD9 225 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.38□□□□□ -0.75
VMP1-211ENST00000591315 TRIM33Q9UPN9 1127 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 LIPT1Q9Y234 373 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 TEX15Q9BXT5 2789 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 POLQO75417 2590 aa10.38□□□□□ -0.75
VMP1-211ENST00000591315 ANKHD1Q8IWZ3 2542 aaKnown RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 A0A087WZY1 265 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 A0A0J9YW62 118 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 AGAP5A6NIR3 686 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 CD8B2A6NJW9 211 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 EIF4E2O60573 245 aaKnown RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 GUSBP08236 651 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 HOXD4P09016 255 aaPredicted RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 PRKCAP17252 672 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 AGAP20933 346 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 RPS4Y1P22090 263 aaKnown RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 CHRNB4P30926 498 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 PTGER4P35408 488 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 SLC6A8P48029 635 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 ZNF41P51814 821 aaPredicted RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 KCNJ10P78508 379 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 HPCAP84074 193 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 TFF3Q07654 80 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 AKAP6Q13023 2319 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 SNTB1Q13884 538 aaKnown RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 BCL2A1Q16548 175 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 CTU2Q2VPK5 515 aaKnown RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 GLYR1Q49A26 553 aaPredicted RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 RUNDC3AQ59EK9 446 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 METTL21CQ5VZV1 264 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 EIF3MQ7L2H7 374 aaKnown RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 DHDDSQ86SQ9 333 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 LACC1Q8IV20 430 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 GCNT2Q8N0V5 402 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 CLIP4Q8N3C7 705 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 RELL2Q8NC24 303 aaPredicted RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 FAM71CQ8NEG0 241 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 OR5W2Q8NH69 310 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 NFKBIDQ8NI38 313 aa10.37□□□□□ -0.75
VMP1-211ENST00000591315 TREX2Q9BQ50 279 aaPredicted RBP10.37□□□□□ -0.75
VMP1-211ENST00000591315 ELAC2Q9BQ52 826 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms