RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 FPR3P25089 353 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 CTXN1P60606 82 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 HBMQ6B0K9 141 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 DNM1P34Q6PK57 102 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 CAMKMTQ7Z624 323 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 MSLNLQ96KJ4 702 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 NT5DC2Q9H857 520 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 HCFC2Q9Y5Z7 792 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 ARRDC5A6NEK1 342 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 PVRP15151 417 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 E2F1Q01094 437 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 FAM205BPQ63HN1 556 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 GLT8D1Q68CQ7 371 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 ZER1Q7Z7L7 766 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 ZNF101Q8IZC7 436 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 BEST4Q8NFU0 473 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 SAGE1Q9NXZ1 904 aa15.99■□□□□ 0.15
SMARCA4-215ENST00000590574 SMLR1H3BR10 107 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 CCR2P41597 374 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 TNFRSF17Q02223 184 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 CCSAPQ6IQ19 270 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 TSTD1Q8NFU3 115 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 MKL2Q9ULH7 1088 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 DHDHQ9UQ10 334 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 TMEM221A6NGB7 291 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 FZD7O75084 574 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 PRKAR1BP31321 381 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 VEGFBP49765 207 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 SELENBP1Q13228 472 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 ZMAT1Q5H9K5 638 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 METRNLQ641Q3 311 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 LHX8Q68G74 356 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 RTL10Q7L3V2 364 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 NKAIN4Q8IVV8 208 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 COQ10AQ96MF6 247 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.98■□□□□ 0.154e-6■□□□□ 8.5
SMARCA4-215ENST00000590574 CYP8B1Q9UNU6 501 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 GBX1Q14549 363 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 THRSPQ92748 146 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 ELP4Q96EB1 424 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 KLHDC7BQ96G42 594 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 HDAC8Q9BY41 377 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 SCP2D1Q9UJQ7 156 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 PLEKHM1Q9Y4G2 1056 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 A0A087WUU8 490 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 TMEM129A0AVI4 362 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 OR5K4A6NMS3 321 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 BSGP35613 385 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 ERVK-25P63136 954 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 LYPD4Q6UWN0 246 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 WASH2PQ6VEQ5 465 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 ZDHHC1Q8WTX9 485 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 CHST8Q9H2A9 424 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 TMEM14AQ9Y6G1 99 aa15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 TRIP12Q14669 1992 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-215ENST00000590574 ARSBP15848 533 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 ATXN7L3Q14CW9 347 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 ARHGAP40Q5TG30 622 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 FAM111BQ6SJ93 734 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 TPRA1Q86W33 373 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 RNASE11Q8TAA1 199 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 TANKQ92844 425 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 SEC61A2Q9H9S3 476 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 CA5BQ9Y2D0 317 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 HSD11B1P28845 292 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 SLC7A6Q92536 515 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 FYTTD1Q96QD9 318 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 ALOXE3Q9BYJ1 711 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 ARL6Q9H0F7 186 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 GALNT9Q9HCQ5 603 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 CD93Q9NPY3 652 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 SIDT1Q9NXL6 827 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 PLEKHA6Q9Y2H5 1048 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 TRBV5-3A0A0A0MS03 114 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 PCP4L1A6NKN8 68 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 PRAMEF2O60811 474 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 LDOC1O95751 146 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 PAHP00439 452 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 TFP02787 698 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 MTNR1BP49286 362 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 RACK1P63244 317 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 LRRC37A5PQ49AS3 106 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 SFXN4Q6P4A7 337 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 SLC16A11Q8NCK7 471 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 GOT1L1Q8NHS2 421 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 PIGUQ9H490 435 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 PLGP00747 810 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 SNRPBP14678 240 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 GJA4P35212 333 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 RRAS2P62070 204 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 ASAH1Q13510 395 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 ZNF440Q8IYI8 595 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 THAP6Q8TBB0 222 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 MYADMQ96S97 322 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 SYNPO2LQ9H987 977 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 NTNG1Q9Y2I2 539 aa15.97■□□□□ 0.15
SMARCA4-215ENST00000590574 A0A1B0GVI7 797 aa15.96■□□□□ 0.15
SMARCA4-215ENST00000590574 DISC1C4P0D8 188 aa15.96■□□□□ 0.15
SMARCA4-215ENST00000590574 NPC1O15118 1278 aa15.96■□□□□ 0.15
SMARCA4-215ENST00000590574 SCO2O43819 266 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms