RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 RAD51DO75771 328 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 KCNK2O95069 426 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 NKX2-2O95096 273 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 HSD3B1P14060 373 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 SLC25A16P16260 332 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 EFNA1P20827 205 aaPredicted RBP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 USF1P22415 310 aaPredicted RBP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 HSD3B2P26439 372 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 MAP3K8P41279 467 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 OR3A2P47893 321 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 SERPINB9P50453 376 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 FABP6P51161 128 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 FOXG1P55316 489 aaPredicted RBP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF117Q03924 483 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 RASA2Q15283 850 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 RNPS1Q15287 305 aaKnown RBP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 DUSP5Q16690 384 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF678Q5SXM1 525 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 Q6ZT83 130 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 TRMT10CQ7L0Y3 403 aaKnown RBP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 SZRD1Q7Z422 152 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 CNPY4Q8N129 248 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 MUC15Q8N387 334 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 SLC16A11Q8NCK7 471 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 DNAJA3Q96EY1 480 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 PAFAH2Q99487 392 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 DHRS9Q9BPW9 319 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 MRPL57Q9BQC6 102 aaKnown RBP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 PSD2Q9BQI7 771 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 SOX7Q9BT81 388 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 PRR14Q9BWN1 585 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 TXLNGYQ9BZA5 131 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 MRPL46Q9H2W6 279 aaKnown RBP13.3□□□□□ -0.28
SF3A2-204ENST00000589118 ANKZF1Q9H8Y5 726 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 C3orf14Q9HBI5 128 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 GIN1Q9NXP7 522 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 POU2F3Q9UKI9 436 aa13.3□□□□□ -0.28
SF3A2-204ENST00000589118 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 A0A087WUV0 522 aaPredicted RBP13.29□□□□□ -0.28
SF3A2-204ENST00000589118 KCNAB3O43448 404 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 DLX3O60479 287 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 PABPC4LP0CB38 370 aaKnown RBP13.29□□□□□ -0.28
SF3A2-204ENST00000589118 PRPS2P11908 318 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 NTSP30990 170 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 DSCR9P59020 149 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF763Q0D2J5 394 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF385BQ569K4 471 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 GALNT18Q6P9A2 607 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 FBXL14Q8N1E6 418 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 FAM110BQ8TC76 370 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 DCAKDQ8WVC6 231 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF75CPQ92670 426 aaPredicted RBP13.29□□□□□ -0.28
SF3A2-204ENST00000589118 CPNE4Q96A23 557 aaPredicted RBP13.29□□□□□ -0.28
SF3A2-204ENST00000589118 MUCL1Q96DR8 90 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 GIMAP5Q96F15 307 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 TMEM216Q9P0N5 145 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 CARD8Q9Y2G2 431 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 TENM1Q9UKZ4 2725 aa13.29□□□□□ -0.28
SF3A2-204ENST00000589118 ARFGEF3Q5TH69 2177 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 TRIM49D1C9J1S8 452 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 M0R1B8 84 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 SMAD9O15198 467 aaKnown RBP13.28□□□□□ -0.28
SF3A2-204ENST00000589118 NUDT14O95848 222 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 INHBAP08476 426 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 GGT1P19440 569 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 THBS2P35442 1172 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 TSNAXIP1Q2TAA8 658 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 FAM166AQ6J272 317 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 TDRPQ86YL5 185 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF433Q8N7K0 673 aaPredicted RBP13.28□□□□□ -0.28
SF3A2-204ENST00000589118 NUP43Q8NFH3 380 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 RFWD2Q8NHY2 731 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 PHOSPHO1Q8TCT1 267 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.28□□□□□ -0.28
SF3A2-204ENST00000589118 ZNF382Q96SR6 550 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 TAS2R7Q9NYW3 318 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 GRID1Q9ULK0 1009 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 KCNS2Q9ULS6 477 aa13.28□□□□□ -0.28
SF3A2-204ENST00000589118 IGHV4-61A0A0C4DH41 118 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 OR5H1A6NKK0 313 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 POC1B-GALNT4F8VUJ3 575 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 RIPK2O43353 540 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 KIAA0513O60268 411 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 HPGDP15428 266 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 CD40P25942 277 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 NTF4P34130 210 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 GPC1P35052 558 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 RASGEF1BQ0VAM2 473 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 CARTPTQ16568 116 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 TIMM23BQ5SRD1 257 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 LRIG3Q6UXM1 1119 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.27□□□□□ -0.29
SF3A2-204ENST00000589118 ZFP90Q8TF47 636 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 HOXB13Q92826 284 aaPredicted RBP13.27□□□□□ -0.29
SF3A2-204ENST00000589118 FOXN4Q96NZ1 517 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 RHOXF2Q9BQY4 288 aa13.27□□□□□ -0.29
SF3A2-204ENST00000589118 QRSL1Q9H0R6 528 aaKnown RBP13.27□□□□□ -0.29
SF3A2-204ENST00000589118 BCO1Q9HAY6 547 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms