RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 COPZ1P61923 177 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 ZNF117Q03924 483 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 TBR1Q16650 682 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 OR5M10Q6IEU7 315 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 TOR1AIP2Q8NFQ8 470 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 B4GALNT2Q8NHY0 566 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 LRTOMTQ8WZ04 291 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 EXTL1Q92935 676 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 JSRP1Q96MG2 331 aaPredicted RBP20.66■□□□□ 0.9
ACTN4-210ENST00000588618 NTNG1Q9Y2I2 539 aa20.66■□□□□ 0.9
ACTN4-210ENST00000588618 TNRC6AQ8NDV7 1962 aaKnown RBP20.66■□□□□ 0.9
ACTN4-210ENST00000588618 SPENQ96T58 3664 aaKnown RBP20.66■□□□□ 0.9
ACTN4-210ENST00000588618 LINGO3P0C6S8 592 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 YAP1P46937 504 aaKnown RBP20.65■□□□□ 0.9
ACTN4-210ENST00000588618 SLC6A8P48029 635 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 SKP2Q13309 424 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 CBLN3Q6UW01 205 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 IGFL2Q6UWQ7 119 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 ZADH2Q8N4Q0 377 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 ZNF347Q96SE7 839 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 PKP2Q99959 881 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 ARHGAP9Q9BRR9 750 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 DCLRE1BQ9H816 532 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 PROK2Q9HC23 129 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 KLF13Q9Y2Y9 288 aaPredicted RBP20.65■□□□□ 0.9
ACTN4-210ENST00000588618 BSNQ9UPA5 3926 aa20.65■□□□□ 0.9
ACTN4-210ENST00000588618 GNGT2O14610 69 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 BAG2O95816 211 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 P2RX1P51575 399 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 CBFBQ13951 182 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 COL28A1Q2UY09 1125 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 PIWIL3Q7Z3Z3 882 aaKnown RBP20.64■□□□□ 0.9
ACTN4-210ENST00000588618 PHF10Q8WUB8 498 aaKnown RBP20.64■□□□□ 0.9
ACTN4-210ENST00000588618 ZNF300Q96RE9 604 aaPredicted RBP20.64■□□□□ 0.9
ACTN4-210ENST00000588618 MCHR1Q99705 422 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 RNPEPL1Q9HAU8 725 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 KLHL1Q9NR64 748 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 ENPP4Q9Y6X5 453 aa20.64■□□□□ 0.9
ACTN4-210ENST00000588618 CST1P01037 141 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 ANPEPP15144 967 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 CNR1P21554 472 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 FASP25445 335 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 MSX1P28360 303 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 TNFSF10P50591 281 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 TAS2R41P59536 307 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 GPR85P60893 370 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 SLC25A25Q6KCM7 469 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 TMEM178AQ8NBL3 297 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 OR4K17Q8NGC6 315 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 ZNF563Q8TA94 476 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 NTNG2Q96CW9 530 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 ZNF559Q9BR84 538 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 PTGES2Q9H7Z7 377 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 RIMS3Q9UJD0 308 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 PCDHGB7Q9Y5F8 929 aa20.64■□□□□ 0.89
ACTN4-210ENST00000588618 FFAR1O14842 300 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 PRSS23O95084 383 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 SP1P08047 785 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 RHCEP18577 417 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 INPP5JQ15735 1006 aaPredicted RBP20.63■□□□□ 0.89
ACTN4-210ENST00000588618 PLEKHM3Q6ZWE6 761 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 AMIGO2Q86SJ2 522 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 PQLC1Q8N2U9 271 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 MDS2Q8NDY4 140 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 OR1J4Q8NGS1 313 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 OR5W2Q8NH69 310 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 ZNF524Q96C55 264 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 ZNF597Q96LX8 424 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 TMEM27Q9HBJ8 222 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 AGPAT4Q9NRZ5 378 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 VNN3Q9NY84 501 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 STX18Q9P2W9 335 aaKnown RBP20.63■□□□□ 0.89
ACTN4-210ENST00000588618 RPS6KB2Q9UBS0 482 aa20.63■□□□□ 0.89
ACTN4-210ENST00000588618 CPSF4LA6NMK7 179 aaKnown RBP20.62■□□□□ 0.89
ACTN4-210ENST00000588618 KLRC4-KLRK1H3BQV0 150 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 GNB5O14775 395 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 FMO6PO60774 539 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 DEAF1O75398 565 aaPredicted RBP20.62■□□□□ 0.89
ACTN4-210ENST00000588618 PGCP20142 388 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 ELAVL4P26378 380 aaKnown RBP20.62■□□□□ 0.89
ACTN4-210ENST00000588618 HTR2AP28223 471 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 ACAA2P42765 397 aaKnown RBP20.62■□□□□ 0.89
ACTN4-210ENST00000588618 DNASE1L1P49184 302 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 SUMO3P55854 103 aaPredicted RBP20.62■□□□□ 0.89
ACTN4-210ENST00000588618 EPS8Q12929 822 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 ZNF766Q5HY98 468 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 PLCZ1Q86YW0 608 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 CADM2Q8N3J6 435 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 NR4A3Q92570 626 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 TMEM41AQ96HV5 264 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 PRRC1Q96M27 445 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 FRMD6Q96NE9 622 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 FAM173AQ9BQD7 235 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 NTN4Q9HB63 628 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 CTPS2Q9NRF8 586 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 SELENONQ9NZV5 590 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 MED11Q9P086 117 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 ICAM5Q9UMF0 924 aa20.62■□□□□ 0.89
ACTN4-210ENST00000588618 BOKQ9UMX3 212 aaPredicted RBP20.62■□□□□ 0.89
ACTN4-210ENST00000588618 TRAV17A0A0B4J275 112 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms