RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SH2D2AQ9NP31 389 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 HPF1Q9NWY4 346 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 KLRF1Q9NZS2 232 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 CNOT11Q9UKZ1 510 aaKnown RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 POLHQ9Y253 713 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 CFAP54Q96N23 3096 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 TRBV4-1A0A0J9YWV2 114 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 A0A1B0GWA3 101 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 EI24O14681 340 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 TP53I11O14683 189 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 HCRTR2O43614 444 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 PEX1O43933 1283 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 EIF4E2O60573 245 aaKnown RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 F10P00742 488 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 ELAVL4P26378 380 aaKnown RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 HLCSP50747 726 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 CCR4P51679 360 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 HMGA2P52926 109 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 SOX8P57073 446 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 SEC23BQ15437 767 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 INPP5JQ15735 1006 aaPredicted RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 FGD3Q5JSP0 725 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 OTUD3Q5T2D3 398 aaPredicted RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 ABHD17BQ5VST6 288 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 OR5M10Q6IEU7 315 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 TMEM81Q6P7N7 255 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 IZUMO2Q6UXV1 221 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 RTL4Q6ZR62 310 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 LINC00696Q6ZRV3 163 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 ZBTB49Q6ZSB9 765 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 MDGA2Q7Z553 956 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 HIPK1Q86Z02 1210 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 ZDHHC13Q8IUH4 622 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 MISPQ8IVT2 679 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 NKAIN4Q8IVV8 208 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 ZNF440Q8IYI8 595 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 DND1Q8IYX4 353 aaKnown RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 CYP4Z2PQ8N1L4 340 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 GALNT4Q8N4A0 578 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 PAQR8Q8TEZ7 354 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 DUSP19Q8WTR2 217 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 NR4A3Q92570 626 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 GATA6Q92908 595 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 NTNG2Q96CW9 530 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 ALPK1Q96QP1 1244 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 SECISBP2Q96T21 854 aaKnown RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 PRSS27Q9BQR3 290 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 FUZQ9BT04 418 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 GABARAPL1Q9H0R8 117 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 CCDC86Q9H6F5 360 aaKnown RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 SMURF2Q9HAU4 748 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 PROK2Q9HC23 129 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 RYDENQ9NUL5 291 aaKnown RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 GPR83Q9NYM4 423 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 STMN3Q9NZ72 180 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 PDP1Q9P0J1 537 aaPredicted RBP10.32□□□□□ -0.76
VMP1-207ENST00000588131 DKK4Q9UBT3 224 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 SLC7A7Q9UM01 511 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 ICAM5Q9UMF0 924 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 WIF1Q9Y5W5 379 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 DOCK10Q96BY6 2186 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 NINQ8N4C6 2090 aa10.32□□□□□ -0.76
VMP1-207ENST00000588131 A0A0B4J2E0 115 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 A0A1B0GX12 115 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 A0A1W2PRQ8 180 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 TRAPPC13A5PLN9 417 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 RASAL1O95294 804 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 LINGO3P0C6S8 592 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 ENDOUP21128 410 aaKnown RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 MST1P26927 711 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 CD96P40200 585 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 IDH2P48735 452 aaKnown RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 AQP4P55087 323 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 RPP38P78345 283 aaKnown RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
VMP1-207ENST00000588131 OC90Q02509 493 aaPredicted RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 C17orf67Q0P5P2 114 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 ST3GAL3Q11203 375 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 TUBA3CQ13748 450 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 DAG1Q14118 895 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 DGCR6Q14129 220 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 TRAM2Q15035 370 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 TOMM34Q15785 309 aaPredicted RBP10.31□□□□□ -0.76
VMP1-207ENST00000588131 MICAQ29983 383 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 COL28A1Q2UY09 1125 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 PPP4R4Q6NUP7 873 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 TUBA3EQ6PEY2 450 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 PODNL1Q6PEZ8 512 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 ZNF613Q6PF04 617 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 WDR88Q6ZMY6 472 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 SPACA3Q8IXA5 215 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 GPALPP1Q8IXQ4 340 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 CADM2Q8N3J6 435 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 LSMEM1Q8N8F7 131 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 CATSPER1Q8NEC5 780 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 OR10G2Q8NGC3 310 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 OR9Q2Q8NGE9 314 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 B4GALNT2Q8NHY0 566 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 SLC7A13Q8TCU3 470 aa10.31□□□□□ -0.76
VMP1-207ENST00000588131 NRBF2Q96F24 287 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms