RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ABCA4P78363 2273 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 A0A1B0GWA3 101 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 CYR61O00622 381 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 SCRG1O75711 98 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 APEHP13798 732 aaKnown RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 NKX2-5P52952 324 aaPredicted RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 ZNF91Q05481 1191 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 ZNF433Q8N7K0 673 aaPredicted RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 FLVCR1-AS1Q8TAF5 88 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 ITFG2Q969R8 447 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 LGALS12Q96DT0 336 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 RNFT2Q96EX2 444 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 NUAK2Q9H093 628 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 CADP27708 2225 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 DUXAA6NLW8 204 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 OR5K4A6NMS3 321 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 HEXBP07686 556 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 ERGP11308 486 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 HTR2AP28223 471 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 GGT2P36268 569 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 SOX2P48431 317 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 OC90Q02509 493 aaPredicted RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 GRM7Q14831 915 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 CD226Q15762 336 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 MRM1Q6IN84 353 aaKnown RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 ZNF511Q8NB15 262 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 TMEM38AQ9H6F2 299 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 ZNF304Q9HCX3 659 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 PLCL2Q9UPR0 1127 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 AP3M1Q9Y2T2 418 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 IER3IP1Q9Y5U9 82 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 EFCAB7A8K855 629 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 H0YAE9 185 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 BMP10O95393 424 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 FBXO45P0C2W1 286 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 PCBP3P57721 371 aaKnown RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 NXPH1P58417 271 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 PSG6Q00889 435 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 PLCXD2Q0VAA5 305 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 BTBD16Q32M84 506 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 RANBP3LQ86VV4 465 aaPredicted RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 KIF18BQ86Y91 864 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 ERI1Q8IV48 349 aaKnown RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 FANK1Q8TC84 345 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 CRB3Q9BUF7 120 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 RTN4RQ9BZR6 473 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 DUSP15Q9H1R2 295 aaPredicted RBP9.5□□□□□ -0.89
RFFL-212ENST00000584655 PISDQ9UG56 409 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 PADI2Q9Y2J8 665 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 CHST2Q9Y4C5 530 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 SPG11Q96JI7 2443 aa9.5□□□□□ -0.89
RFFL-212ENST00000584655 ELOA3DA6NLF2 546 aaPredicted RBP9.49□□□□□ -0.89
RFFL-212ENST00000584655 A8MV72 311 aaPredicted RBP9.49□□□□□ -0.89
RFFL-212ENST00000584655 IDSB3KWA1 339 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 DYRK3O43781 588 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 LGI1O95970 557 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 OSMP13725 252 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 AQP2P41181 271 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 CSNK2BP67870 215 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 BIKQ13323 160 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 TRAM2Q15035 370 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 INAQ16352 499 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 ELOA3BQ3SY89 546 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 SLC27A4Q6P1M0 643 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 KIRREL2Q6UWL6 708 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 SIRT6Q8N6T7 355 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 ELOA3Q8NG57 546 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 OR52L1Q8NGH7 329 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 STT3BQ8TCJ2 826 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 BPIFA2Q96DR5 249 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 NMNAT3Q96T66 252 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 OR52D1Q9H346 318 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 MTHFD2LQ9H903 347 aaPredicted RBP9.49□□□□□ -0.89
RFFL-212ENST00000584655 TIMMDC1Q9NPL8 285 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 TIGARQ9NQ88 270 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 KLRF1Q9NZS2 232 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 IKZF2Q9UKS7 526 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 CNOT11Q9UKZ1 510 aaKnown RBP9.49□□□□□ -0.89
RFFL-212ENST00000584655 DIDO1Q9BTC0 2240 aaKnown RBP9.49□□□□□ -0.89
RFFL-212ENST00000584655 TEAD1P28347 426 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 CHAF1BQ13112 559 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 CRMP1Q14194 572 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 RGS21Q2M5E4 152 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 TP53I3Q53FA7 332 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 LCN10Q6JVE6 187 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 PLXDC1Q8IUK5 500 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 TMEM239Q8WW34 195 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 METTL21AQ8WXB1 218 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 NPAS1Q99742 590 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 MED11Q9P086 117 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 PTGFRNQ9P2B2 879 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 NDRG4Q9ULP0 352 aaKnown RBP9.49□□□□□ -0.89
RFFL-212ENST00000584655 A0A1B0GTH9 108 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 ANKRD33BA6NCL7 494 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 CDRT1O95170 752 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 THY1P04216 161 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 ADORA3P0DMS8 318 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 VASPP50552 380 aaPredicted RBP9.49□□□□□ -0.89
RFFL-212ENST00000584655 HSD11B2P80365 405 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 RSPO4Q2I0M5 234 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms