RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 RYKP34925 604 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 CYB561P49447 251 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 HLCSP50747 726 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 HMGA2P52926 109 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 TAS2R41P59536 307 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 EPS8Q12929 822 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 COLEC12Q5KU26 742 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 MDGA2Q7Z553 956 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 ZNF227Q86WZ6 799 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 MISPQ8IVT2 679 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 CYP4Z2PQ8N1L4 340 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 OR52J3Q8NH60 311 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 SH3YL1Q96HL8 342 aaPredicted RBP16.58■□□□□ 0.24
NDEL1-217ENST00000583683 EPYCQ99645 322 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 GPR83Q9NYM4 423 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 CNOT11Q9UKZ1 510 aaKnown RBP16.58■□□□□ 0.24
NDEL1-217ENST00000583683 ICAM5Q9UMF0 924 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 MAGED1Q9Y5V3 778 aaPredicted RBP16.58■□□□□ 0.24
NDEL1-217ENST00000583683 KCNMB2Q9Y691 235 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 CNTRLQ7Z7A1 2325 aa16.58■□□□□ 0.24
NDEL1-217ENST00000583683 B4DXG7 233 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 EIF4E2O60573 245 aaKnown RBP16.57■□□□□ 0.24
NDEL1-217ENST00000583683 GADD45GO95257 159 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 THY1P04216 161 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 HOXD11P31277 338 aaPredicted RBP16.57■□□□□ 0.24
NDEL1-217ENST00000583683 DNAJA1P31689 397 aaKnown RBP16.57■□□□□ 0.24
NDEL1-217ENST00000583683 VHLP40337 213 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 LIMS1P48059 325 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 RPP38P78345 283 aaKnown RBP16.57■□□□□ 0.24
NDEL1-217ENST00000583683 C17orf67Q0P5P2 114 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 SNTA1Q13424 505 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 OR1Q1Q15612 314 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 AGAP7PQ5VUJ5 663 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 SLC22A10Q63ZE4 541 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 RTL4Q6ZR62 310 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 LINC00696Q6ZRV3 163 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 PLEKHM3Q6ZWE6 761 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 GPALPP1Q8IXQ4 340 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 OFCC1Q8IZS5 231 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 HS3ST5Q8IZT8 346 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 TMCO5AQ8N6Q1 288 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 LSMEM1Q8N8F7 131 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 PIK3C3Q8NEB9 887 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 AGAP4Q96P64 663 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 KLHDC3Q9BQ90 382 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 ZNF559Q9BR84 538 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 FNDC11Q9BVV2 318 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 OSBPL11Q9BXB4 747 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 MAN2C1Q9NTJ4 1040 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 WIF1Q9Y5W5 379 aa16.57■□□□□ 0.24
NDEL1-217ENST00000583683 URB1O60287 2271 aaKnown RBP16.57■□□□□ 0.24
NDEL1-217ENST00000583683 G3V2T6 193 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 PDLIM1O00151 329 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 TNFRSF11BO00300 401 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 H1F0P07305 194 aaKnown RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 CD96P40200 585 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 CCR4P51679 360 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 PRAMEF20Q5VT98 475 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 SHQ1Q6PI26 577 aaKnown RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 CCDC81Q6ZN84 652 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 ZDHHC13Q8IUH4 622 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 OR4C15Q8NGM1 316 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 OR5K1Q8NHB7 308 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 NR4A3Q92570 626 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 NTNG2Q96CW9 530 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 FRMD6Q96NE9 622 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 BARD1Q99728 777 aaKnown RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 POLR2J2Q9GZM3 115 aaKnown RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 YIPF3Q9GZM5 350 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 POLR2J3Q9H1A7 115 aaKnown RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 ZNF552Q9H707 407 aaPredicted RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 PROK2Q9HC23 129 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 ABI3Q9P2A4 366 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 A0A1W2PRQ8 180 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 OR5F1O95221 314 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 F10P00742 488 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 FPR1P21462 350 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 CCL11P51671 97 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 OC90Q02509 493 aaPredicted RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 FOXD4Q12950 439 aaPredicted RBP16.56■□□□□ 0.24
NDEL1-217ENST00000583683 TUBA3CQ13748 450 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 DGCR6Q14129 220 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 LAPTM4AQ15012 233 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 OR5M10Q6IEU7 315 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 TUBA3EQ6PEY2 450 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 TBPL2Q6SJ96 375 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 ISLR2Q6UXK2 745 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 SVOPLQ8N434 492 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 FDCSPQ8NFU4 85 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 ZNF524Q96C55 264 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 ANGPTL4Q9BY76 406 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 COQ10BQ9H8M1 238 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 CPNE5Q9HCH3 593 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 CNIH4Q9P003 139 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 LRFN1Q9P244 771 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 LRCH1Q9Y2L9 728 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 HRH3Q9Y5N1 445 aa16.56■□□□□ 0.24
NDEL1-217ENST00000583683 TRAPPC13A5PLN9 417 aa16.55■□□□□ 0.24
NDEL1-217ENST00000583683 ANKRD33BA6NCL7 494 aa16.55■□□□□ 0.24
NDEL1-217ENST00000583683 SOCS2O14508 198 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms