RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 FRMPD4Q14CM0 1322 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 PP2D1A8MPX8 630 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 BTN3A3O00478 584 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 OR7A17O14581 309 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 EFNA2O43921 213 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 TSC22D2O75157 780 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 SPAG6O75602 509 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 SCGNO76038 276 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 NEBLO76041 1014 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 LRATO95237 230 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 F10P00742 488 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 IQCF3P0C7M6 154 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 CALB2P22676 271 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 GLRA2P23416 452 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 YWHABP31946 246 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 RPL29P47914 159 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 HNMTP50135 292 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 P2RY4P51582 365 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 GBX2P52951 348 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 ERVPABLB-1P60509 514 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 EWSR1Q01844 656 aaKnown RBP eCLIP2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 PDK3Q15120 406 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 SYPL1Q16563 259 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 SLC5A12Q1EHB4 618 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 FAM120AOSQ5T036 256 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 ZNF658Q5TYW1 1059 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 PYHIN1Q6K0P9 492 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 KIAA1328Q86T90 577 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 HPS6Q86YV9 775 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 GPR65Q8IYL9 337 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 TBC1D21Q8IYX1 336 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 ANKFN1Q8N957 763 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 OR2T33Q8NG76 320 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 OR52M1Q8NGK5 317 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 OR13F1Q8NGS4 319 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 MRAPQ8TCY5 172 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 PSMG2Q969U7 264 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 FAF2Q96CS3 445 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 C12orf66Q96MD2 445 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 CAB39LQ9H9S4 337 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 MEAF6Q9HAF1 191 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 PIPOXQ9P0Z9 390 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 TBK1Q9UHD2 729 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 ZNF221Q9UK13 617 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 RASD1Q9Y272 281 aa2.79□□□□□ -1.96
SMCHD1-209ENST00000583441 IGLV8-61A0A075B6I0 122 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 IGHV2-70DA0A0C4DH43 119 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 SMIM28A0A1B0GU29 152 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 CLRN2A0PK11 232 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 K7ENP7 123 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 WWP2O00308 870 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 SCRG1O75711 98 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 DBTP11182 482 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 PAX7P23759 505 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 FASP25445 335 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 IL2RGP31785 369 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 UGT1A3P35503 534 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 HPCAL1P37235 193 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 GPM6BQ13491 265 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 PRR4Q16378 134 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 LIPNQ5VXI9 398 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 TFAP2EQ6VUC0 442 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 CCDC50Q8IVM0 306 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 LRRC43Q8N309 656 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 MTURNQ8N3F0 131 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 SLC5A11Q8WWX8 675 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 MRPS31Q92665 395 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 EMG1Q92979 244 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 FGGYQ96C11 551 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 SERAC1Q96JX3 654 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 ZSCAN5AQ9BUG6 496 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 NXF5Q9H1B4 397 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 SMYD3Q9H7B4 428 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 RPS10P5Q9NQ39 176 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 ZNF275Q9NSD4 429 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 CHRNA9Q9UGM1 479 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 PCSK1NQ9UHG2 260 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 KLHL21Q9UJP4 597 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 USP16Q9Y5T5 823 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 SLCO1B1Q9Y6L6 691 aa2.78□□□□□ -1.96
SMCHD1-209ENST00000583441 LOC100131303A0A0U1RQF7 123 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 A0A1W2PQ72 361 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 E7ESA3 106 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 H3BMQ9 156 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 TAPBPO15533 448 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 SRSF10O75494 262 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 GPX5O75715 221 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 SERF1AO75920 110 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 HSMCR30P0CW71 290 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 ZNF44P15621 663 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 ADORA2BP29275 332 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 GCKP35557 465 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 KIR2DS2P43631 304 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC26A2P50443 739 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 HNRNPA3P51991 378 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 PLK1P53350 603 aa2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 MRPS11P82912 194 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-209ENST00000583441 SLC10A7Q0GE19 358 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms