RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 AMDHD1Q96NU7 426 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 PSD2Q9BQI7 771 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 PIMREGQ9BSJ6 248 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 INPP5KQ9BT40 448 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 COQ10BQ9H8M1 238 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 MIEF1Q9NQG6 463 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 TAS2R7Q9NYW3 318 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 GRHL1Q9NZI5 618 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 ING1Q9UK53 422 aaPredicted RBP11.22□□□□□ -0.61
SS18-219ENST00000581570 ATP23Q9Y6H3 246 aa11.22□□□□□ -0.61
SS18-219ENST00000581570 IGHV4-61A0A0C4DH41 118 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 CIB4A0PJX0 185 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 FAM187AA6NFU0 413 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 SCDO00767 359 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 NKX2-2O95096 273 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 PRPS2P11908 318 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 HMOX2P30519 316 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 SRP14P37108 136 aaKnown RBP11.21□□□□□ -0.61
SS18-219ENST00000581570 PLTPP55058 493 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 RAC3P60763 192 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 CHRNEQ04844 493 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 CLCQ05315 142 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 ZNF763Q0D2J5 394 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 RASGEF1BQ0VAM2 473 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 RASA2Q15283 850 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 VPS26BQ4G0F5 336 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 IQCCQ4KMZ1 466 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 ZAR1Q86SH2 424 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 ZNF100Q8IYN0 542 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 FBXO27Q8NI29 283 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 METTL6Q8TCB7 284 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 ZFP90Q8TF47 636 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 C1QTNF3Q9BXJ4 246 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 UBQLN4Q9NRR5 601 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 SLC25A15Q9Y619 301 aa11.21□□□□□ -0.61
SS18-219ENST00000581570 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.62
SS18-219ENST00000581570 A0A1W2PNR3 127 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 A0A1W2PQD3 144 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 A0A1W2PR80 420 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 A8MT66 165 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 M0R1B8 84 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 ZSCAN12O43309 604 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 RAD51DO75771 328 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 KCNK2O95069 426 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 NUDT14O95848 222 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 IFI6P09912 130 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 EGR1P18146 543 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 SLC7A1P30825 629 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 APOBEC3AP31941 199 aaPredicted RBP11.2□□□□□ -0.62
SS18-219ENST00000581570 MAP3K8P41279 467 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 HTR6P50406 440 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 PRKAG1P54619 331 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 TRADDQ15628 312 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 CD226Q15762 336 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 CARTPTQ16568 116 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 TSNAXIP1Q2TAA8 658 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 FAM71E1Q6IPT2 247 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 CDRT4Q8N9R6 151 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 OR6Y1Q8NGX8 325 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.2□□□□□ -0.62
SS18-219ENST00000581570 HOXB13Q92826 284 aaPredicted RBP11.2□□□□□ -0.62
SS18-219ENST00000581570 FOXN4Q96NZ1 517 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 ZNF300Q96RE9 604 aaPredicted RBP11.2□□□□□ -0.62
SS18-219ENST00000581570 MRPL57Q9BQC6 102 aaKnown RBP11.2□□□□□ -0.62
SS18-219ENST00000581570 MYNNQ9NPC7 610 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 SIRT5Q9NXA8 310 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 NTMQ9P121 344 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 FKBP7Q9Y680 259 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 SAR1BQ9Y6B6 198 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 MALRD1Q5VYJ5 2156 aa11.2□□□□□ -0.62
SS18-219ENST00000581570 CCT8L1PA6NM43 557 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 ZNF724A8MTY0 619 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 KIF2AO00139 706 aaPredicted RBP11.19□□□□□ -0.62
SS18-219ENST00000581570 CYTIPO60759 359 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 SUPT7LO94864 414 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 ZNF23P17027 643 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 LCN1P31025 176 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 GPC1P35052 558 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 GUCY2DQ02846 1103 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 CAV1Q03135 178 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 FAM174BQ3ZCQ3 159 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 SPDYAQ5MJ70 313 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 GPRIN3Q6ZVF9 776 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 ZNF551Q7Z340 670 aaPredicted RBP11.19□□□□□ -0.62
SS18-219ENST00000581570 GALNT5Q7Z7M9 940 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 UBE2J2Q8N2K1 259 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 CEP70Q8NHQ1 597 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 SGMS2Q8NHU3 365 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 FBXO30Q8TB52 745 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 FBXO25Q8TCJ0 367 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 PHOSPHO1Q8TCT1 267 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 ZNF75CPQ92670 426 aaPredicted RBP11.19□□□□□ -0.62
SS18-219ENST00000581570 ZMYND19Q96E35 227 aaPredicted RBP11.19□□□□□ -0.62
SS18-219ENST00000581570 ZNF382Q96SR6 550 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 TRMOQ9BU70 441 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 C1QTNF6Q9BXI9 259 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 MRPL46Q9H2W6 279 aaKnown RBP11.19□□□□□ -0.62
SS18-219ENST00000581570 FKRPQ9H9S5 495 aa11.19□□□□□ -0.62
SS18-219ENST00000581570 GPC6Q9Y625 555 aaPredicted RBP11.19□□□□□ -0.62
SS18-219ENST00000581570 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.19□□□□□ -0.624e-6■■■□□ 17.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms