RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 OLIG3Q7RTU3 272 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 GGNQ86UU5 652 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 CCDC71Q8IV32 467 aaPredicted RBP11.39□□□□□ -0.59
SNORD55-201ENST00000581525 LIX1LQ8IVB5 337 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 GATSQ8NAP1 163 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 NAXEQ8NCW5 288 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 TNIP2Q8NFZ5 429 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 CA5BP1Q8WTZ4 195 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 THOC1Q96FV9 657 aaKnown RBP11.39□□□□□ -0.59
SNORD55-201ENST00000581525 AURKBQ96GD4 344 aaPredicted RBP11.39□□□□□ -0.59
SNORD55-201ENST00000581525 NPAS1Q99742 590 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 SPOCK3Q9BQ16 436 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 TMEM120AQ9BXJ8 343 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 RAD21L1Q9H4I0 556 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 RUBCNLQ9H714 662 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 BCL2L10Q9HD36 194 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.39□□□□□ -0.59
SNORD55-201ENST00000581525 FGFR1OP2Q9NVK5 253 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 ALKBH4Q9NXW9 302 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 CALML5Q9NZT1 146 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 JKAMPQ9P055 326 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 STOML1Q9UBI4 398 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 SLC35A3Q9Y2D2 325 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 RPH3AQ9Y2J0 694 aaPredicted RBP11.39□□□□□ -0.59
SNORD55-201ENST00000581525 GPC6Q9Y625 555 aaPredicted RBP11.39□□□□□ -0.59
SNORD55-201ENST00000581525 CENPEQ02224 2701 aa11.39□□□□□ -0.59
SNORD55-201ENST00000581525 DCHS2Q6V1P9 2916 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 A0A0G2JPF8 293 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 HNRNPCL2B2RXH8 293 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 HNRNPCL3B7ZW38 293 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 GTPBP1O00178 669 aaKnown RBP11.38□□□□□ -0.59
SNORD55-201ENST00000581525 FAAHO00519 579 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 HNRNPCL1O60812 293 aaKnown RBP11.38□□□□□ -0.59
SNORD55-201ENST00000581525 ANP32DO95626 131 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 HNRNPCL4P0DMR1 293 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 UBL4AP11441 157 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 ETFAP13804 333 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 PPIBP23284 216 aaKnown RBP11.38□□□□□ -0.59
SNORD55-201ENST00000581525 ZNF136P52737 540 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 ARFIP2P53365 341 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 CLDN20P56880 219 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 DSTNP60981 165 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 EEF1A1P68104 462 aaKnown RBP11.38□□□□□ -0.59
SNORD55-201ENST00000581525 TOMM34Q15785 309 aaPredicted RBP11.38□□□□□ -0.59
SNORD55-201ENST00000581525 CTU2Q2VPK5 515 aaKnown RBP11.38□□□□□ -0.59
SNORD55-201ENST00000581525 SLC25A35Q3KQZ1 300 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 RUNDC3AQ59EK9 446 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 EEF1A1P5Q5VTE0 462 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 RAET1LQ5VY80 246 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 GRAMD2AQ8IUY3 354 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 SLC38A5Q8WUX1 472 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 MRGPRX4Q96LA9 322 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 TM9SF2Q99805 663 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 A4GALTQ9NPC4 353 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 VAPAQ9P0L0 249 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 KLHL14Q9P2G3 628 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 ZNF175Q9Y473 711 aa11.38□□□□□ -0.59
SNORD55-201ENST00000581525 CLCA1A8K7I4 914 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 PRSS44E7EML9 344 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 SLC22A2O15244 555 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 CSTAP01040 98 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 NPPAP01160 153 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 IL2RAP01589 272 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 CRHP06850 196 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 SNRPB2P08579 225 aaKnown RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 VIMP08670 466 aaKnown RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 PRKCAP17252 672 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 POU3F2P20265 443 aaPredicted RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 CTSSP25774 331 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 COL8A1P27658 744 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 CRATP43155 626 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 PCYT1AP49585 367 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 ZNF41P51814 821 aaPredicted RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 GNA13Q14344 377 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 GUSBP1Q15486 140 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 ZSWIM7Q19AV6 140 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 GPAT3Q53EU6 434 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 COQ5Q5HYK3 327 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 C6orf10Q5SRN2 563 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 ESPNLQ6ZVH7 1005 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 RETREG3Q86VR2 466 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 MEIOBQ8N635 442 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 C9orf106Q8NAJ2 232 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 OR10Q1Q8NGQ4 319 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 PNPT1Q8TCS8 783 aaKnown RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 ST8SIA1Q92185 356 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 SH3YL1Q96HL8 342 aaPredicted RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 TRIB1Q96RU8 372 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 TMEM38AQ9H6F2 299 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 KCNJ16Q9NPI9 418 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 SAR1AQ9NR31 198 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 ACER3Q9NUN7 267 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 PAQR5Q9NXK6 330 aaPredicted RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 P2RX2Q9UBL9 471 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 LEF1Q9UJU2 399 aaPredicted RBP11.37□□□□□ -0.59
SNORD55-201ENST00000581525 VDAC3Q9Y277 283 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 NDUFAF1Q9Y375 327 aa11.37□□□□□ -0.59
SNORD55-201ENST00000581525 ARHGAP21Q5T5U3 1957 aa11.36□□□□□ -0.59
SNORD55-201ENST00000581525 ITPR2Q14571 2701 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms