RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 ZIC2O95409 532 aaPredicted RBP14.14□□□□□ -0.15
SS18-216ENST00000580751 ATP6V1G2O95670 118 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 DBIP07108 87 aaKnown RBP14.14□□□□□ -0.15
SS18-216ENST00000580751 NPIPA8P0DM63 369 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 PRKAR1BP31321 381 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 TLE1Q04724 770 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 CHRNEQ04844 493 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 ZNF141Q15928 474 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 KLHL26Q53HC5 615 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 RNFT1Q5M7Z0 435 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 FNDC7Q5VTL7 733 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 DHRS4L2Q6PKH6 230 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 APOOLQ6UXV4 268 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 PLCZ1Q86YW0 608 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 SIAH3Q8IW03 269 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 TMEM251Q8N6I4 163 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 ZNF614Q8N883 585 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 WDSUB1Q8N9V3 476 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 SLC35B4Q969S0 331 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 TAMM41Q96BW9 452 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 PINK1Q9BXM7 581 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 ARMC7Q9H6L4 198 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 RUBCNLQ9H714 662 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 SEC14L3Q9UDX4 400 aa14.14□□□□□ -0.15
SS18-216ENST00000580751 IGLV3-32A0A0A0MS00 114 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 C2orf72A6NCS6 295 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 AGAP5A6NIR3 686 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 NPIPA5E9PKD4 350 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 ADAM10O14672 748 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 UGT2B17O75795 530 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 CBR3O75828 277 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 ZNF682O95780 498 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 EDN3P14138 238 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 RPS4Y1P22090 263 aaKnown RBP14.13□□□□□ -0.15
SS18-216ENST00000580751 GDF1P27539 372 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 AQP1P29972 269 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 MAGEA2P43356 314 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 KCNJ5P48544 419 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 CRYBA2P53672 197 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 KCNC4Q03721 635 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 LARS2Q15031 903 aaKnown RBP14.13□□□□□ -0.15
SS18-216ENST00000580751 EIPR1Q53HC9 387 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 KRTCAP3Q53RY4 240 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 PDZK1Q5T2W1 519 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 OLIG3Q7RTU3 272 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 PIWIL3Q7Z3Z3 882 aaKnown RBP14.13□□□□□ -0.15
SS18-216ENST00000580751 CMIPQ8IY22 773 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 OR4K17Q8NGC6 315 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 DUSP19Q8WTR2 217 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 GEMIN6Q8WXD5 167 aaKnown RBP14.13□□□□□ -0.15
SS18-216ENST00000580751 GPR137Q96N19 417 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 GNRHR2Q96P88 292 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 RTN4RQ9BZR6 473 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 UBQLN3Q9H347 655 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 ZDHHC11Q9H8X9 412 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 IL1RAPQ9NPH3 570 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 NPIPA1Q9UND3 350 aa14.13□□□□□ -0.15
SS18-216ENST00000580751 SERINC4A6NH21 518 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 H3BNX3 289 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 KRT36O76013 467 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 SEMG1P04279 462 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 RFPL3SP0C7P2 107 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 PABPC4LP0CB38 370 aaKnown RBP14.12□□□□□ -0.15
SS18-216ENST00000580751 ITGA2P17301 1181 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 MST1P26927 711 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 MSX1P28360 303 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 MAGEA5P43359 124 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 TDGF1P3P51864 188 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 GK3PQ14409 553 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 GANABQ14697 944 aaKnown RBP14.12□□□□□ -0.15
SS18-216ENST00000580751 RCN1Q15293 331 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 CD226Q15762 336 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 LIN52Q52LA3 116 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 IFI44LQ53G44 452 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 RNF220Q5VTB9 566 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 FADS6Q8N9I5 356 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 GATSQ8NAP1 163 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 PHOSPHO1Q8TCT1 267 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 PYDC1Q8WXC3 89 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 PROX1Q92786 737 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 SLCO4A1Q96BD0 722 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 SLC47A1Q96FL8 570 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 CHID1Q9BWS9 393 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 TSPAN10Q9H1Z9 355 aaPredicted RBP14.12□□□□□ -0.15
SS18-216ENST00000580751 PTGES2Q9H7Z7 377 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 KLHL28Q9NXS3 571 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 KCNE5Q9UJ90 142 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 AURKCQ9UQB9 309 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 SLC35A3Q9Y2D2 325 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 SHANK1Q9Y566 2161 aa14.12□□□□□ -0.15
SS18-216ENST00000580751 CENPVL1A0A0U1RR11 272 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 GTPBP1O00178 669 aaKnown RBP14.11□□□□□ -0.15
SS18-216ENST00000580751 HCRTR2O43614 444 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 HPNP05981 417 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 UBL4AP11441 157 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 ANPEPP15144 967 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 IL7RP16871 459 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 CD247P20963 164 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 FASP25445 335 aa14.11□□□□□ -0.15
SS18-216ENST00000580751 SRD5A2P31213 254 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms