RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 RACGAP1Q9H0H5 632 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 PLK3Q9H4B4 646 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 CAB39LQ9H9S4 337 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 POPDC3Q9HBV1 291 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 OPTCQ9UBM4 332 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 ADAM29Q9UKF5 820 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 RNF11Q9Y3C5 154 aa6.66□□□□□ -1.34
SMARCE1-217ENST00000580654 CIB4A0PJX0 185 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 CCT8L1PA6NM43 557 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 B9A039 149 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 UBXN8O00124 270 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 PHGDHO43175 533 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 PLOD3O60568 738 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 PDE5AO76074 875 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 UTS2O95399 124 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 PNPP00491 289 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 FSHBP01225 129 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 ITGA5P08648 1049 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 LINGO3P0C6S8 592 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 IFNGR1P15260 489 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 ADRA2CP18825 462 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 MDKP21741 143 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 GCH1P30793 250 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 NTF4P34130 210 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 KHKP50053 298 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 MAPK12P53778 367 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 RAB10P61026 200 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 PHEXP78562 749 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 SLC18A2Q05940 514 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 GALNT1Q10472 559 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF155Q12901 538 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 FOXF1Q12946 379 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 EFNB3Q15768 340 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 CYP27C1Q4G0S4 372 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 HP1BP3Q5SSJ5 553 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 RNASEH2BQ5TBB1 312 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 FBXW9Q5XUX1 488 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 STEAP4Q687X5 459 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 Q6ZPA2 131 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 RHOUQ7L0Q8 258 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 SPATA19Q7Z5L4 167 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 SLC43A2Q8N370 569 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 METTL4Q8N3J2 472 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 TEX9Q8N6V9 391 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 CDYL2Q8N8U2 506 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 TRIM58Q8NG06 486 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 TRPC4APQ8TEL6 797 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 WDR60Q8WVS4 1066 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 C22orf15Q8WYQ4 148 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 DVL3Q92997 716 aaPredicted RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 ZNF524Q96C55 264 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 ERP27Q96DN0 273 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 MRGPRX4Q96LA9 322 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 DUX5Q96PT3 197 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 ATOH8Q96SQ7 321 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 SERPINI1Q99574 410 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 TMPRSS13Q9BYE2 586 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 TBL1XR1Q9BZK7 514 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 RAB1BQ9H0U4 201 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 MMP27Q9H306 513 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 NARFLQ9H6Q4 476 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 DDX28Q9NUL7 540 aaKnown RBP6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 NUDT4Q9NZJ9 180 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 KLHL9Q9P2J3 617 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 MCM8Q9UJA3 840 aa6.65□□□□□ -1.34
SMARCE1-217ENST00000580654 GXYLT2A0PJZ3 443 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 DNAJC9-AS1A6NH13 148 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF724A8MTY0 619 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 PDLIM1O00151 329 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 CYTIPO60759 359 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 SHOX2O60902 331 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 IPO7O95373 1038 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 BCL10O95999 233 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 OR4A8P0C604 315 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 GAAP10253 952 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 MTHFD2P13995 350 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ME2P23368 584 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 PRTN3P24158 256 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 RFX3P48380 749 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ALDH9A1P49189 494 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 CLK3P49761 638 aaKnown RBP6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ATP6V0D1P61421 351 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 LMO4P61968 165 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 IL13RA1P78552 427 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 RASGEF1BQ0VAM2 473 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 DLG1Q12959 904 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 DECR1Q16698 335 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ERCC6LQ2NKX8 1250 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 TMEM176BQ3YBM2 270 aaPredicted RBP6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 FAM219BQ5XKK7 198 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 COMMD6Q7Z4G1 85 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ISCA2Q86U28 154 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 PPIL6Q8IXY8 311 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 ZNF100Q8IYN0 542 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 BPIFB2Q8N4F0 458 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 SIGLECL1Q8N7X8 197 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 L3MBTL4Q8NA19 623 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 GATSQ8NAP1 163 aa6.64□□□□□ -1.35
SMARCE1-217ENST00000580654 TOR1AIP2Q8NFQ8 470 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms