RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 TSC22D4Q9Y3Q8 395 aa12.14□□□□□ -0.47
CSNK1D-213ENST00000580446 A0A087WZY1 265 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 IGHV1-18A0A0C4DH31 117 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 PHGDHO43175 533 aaKnown RBP12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 FSHBP01225 129 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 TFP02787 698 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 S100BP04271 92 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 TPM3P06753 285 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC1A3P43003 542 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 PRIM2P49643 509 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 CUL3Q13618 768 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 EFNB3Q15768 340 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 CYP27C1Q4G0S4 372 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 MSS51Q4VC12 460 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 HIKESHIQ53FT3 197 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 TCHHL1Q5QJ38 904 aaPredicted RBP12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 ELFN2Q5R3F8 820 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 AVPI1Q5T686 147 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 DCAF12L2Q5VW00 463 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 CNGA4Q8IV77 575 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 PDPRQ8NCN5 879 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 DNAJA3Q96EY1 480 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 MUS81Q96NY9 551 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC52A3Q9NQ40 469 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC17A5Q9NRA2 495 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 TNFRSF19Q9NS68 423 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 TAS2R16Q9NYV7 291 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 OPTCQ9UBM4 332 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 CAPN6Q9Y6Q1 641 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 ZNF780BQ9Y6R6 833 aa12.13□□□□□ -0.47
CSNK1D-213ENST00000580446 C1orf226A1L170 272 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 C7orf72A4D263 438 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC22A31A6NKX4 558 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 PPIHO43447 177 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 PIAS1O75925 651 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 KRT14P02533 472 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 HPXP02790 462 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 ERCC1P07992 297 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 CDH2P19022 906 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 THBS4P35443 961 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 KHKP50053 298 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 PRR5P85299 388 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 DECR1Q16698 335 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC43A2Q8N370 569 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 TEX29Q8N6K0 151 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 FBXO27Q8NI29 283 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 ZFP90Q8TF47 636 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 YIPF5Q969M3 257 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 SLC25A28Q96A46 364 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 EXOSC8Q96B26 276 aaKnown RBP12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 APH1AQ96BI3 265 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 MRGPRX4Q96LA9 322 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 DOK1Q99704 481 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 ASB6Q9NWX5 421 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 FBXO9Q9UK97 447 aaPredicted RBP12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 UTS2RQ9UKP6 389 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 RNF11Q9Y3C5 154 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 RYR2Q92736 4967 aa12.12□□□□□ -0.47
CSNK1D-213ENST00000580446 TMEM129A0AVI4 362 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 K7EPI3 171 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 ZNF195O14628 629 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 TIMM23O14925 209 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 OIP5O43482 229 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 GPANK1O95872 356 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 CD1DP15813 335 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 CALCRP30988 508 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 ARFIP1P53367 373 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 LOXL3P58215 753 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 TUBA1BP68363 451 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 TUBA4AP68366 448 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 PHEXP78562 749 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 MYBPC1Q00872 1141 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 SGO1Q5FBB7 561 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 TUBA1AQ71U36 451 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 ZC3HC1Q86WB0 502 aaKnown RBP12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 ZNF675Q8TD23 568 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 ZNF524Q96C55 264 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 TM4SF18Q96CE8 201 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 CDK15Q96Q40 435 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 GATA5Q9BWX5 397 aaPredicted RBP12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 DERL2Q9GZP9 239 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 SENP1Q9P0U3 644 aa12.11□□□□□ -0.47
CSNK1D-213ENST00000580446 TENM2Q9NT68 2774 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 SUPT3HB4E1H0 165 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 UBXN8O00124 270 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 CYTIPO60759 359 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 SUPT3HO75486 399 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 SKAP2O75563 359 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 LINGO3P0C6S8 592 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 GPC1P35052 558 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 MVKQ03426 396 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 ZNHIT3Q15649 155 aaPredicted RBP12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 SPANXN3Q5MJ09 141 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 ACSM5Q6NUN0 579 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 CAVIN1Q6NZI2 390 aaKnown RBP12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 TTC27Q6P3X3 843 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 GALNT18Q6P9A2 607 aa12.1□□□□□ -0.47
CSNK1D-213ENST00000580446 DRICH1Q6PGQ1 229 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms